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HSC70-1 heat shock cognate protein 70-1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831020, updated on 12-Aug-2018

Summary

Gene symbol
HSC70-1
Gene description
heat shock cognate protein 70-1
Primary source
Araport:AT5G02500
Locus tag
AT5G02500
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1; AT-HSC70-1; AtHsp70-1; HEAT SHOCK COGNATE PROTEIN 70; heat shock cognate protein 70-1; HEAT SHOCK PROTEIN 70-1; HSC70; HSP70-1; T22P11.90; T22P11_90
Summary
encodes a member of heat shock protein 70 family.

Genomic context

See HSC70-1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (553745..556623, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene HSP20-like chaperones superfamily protein Neighboring gene Heat shock protein 70 (Hsp 70) family protein Neighboring gene Oligosaccaryltransferase Neighboring gene tRNA

Bibliography

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

NM_001125684.1
NM_120328.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
protease binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
defense response to bacterium IMP
Inferred from Mutant Phenotype
more info
PubMed 
defense response to fungus IMP
Inferred from Mutant Phenotype
more info
PubMed 
defense response to other organism IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of seed germination IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein folding TAS
Traceable Author Statement
more info
PubMed 
response to cadmium ion IEP
Inferred from Expression Pattern
more info
PubMed 
response to cold IEP
Inferred from Expression Pattern
more info
PubMed 
response to heat IEP
Inferred from Expression Pattern
more info
PubMed 
response to heat IMP
Inferred from Mutant Phenotype
more info
PubMed 
response to virus IEP
Inferred from Expression Pattern
more info
PubMed 
stomatal closure IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
apoplast IDA
Inferred from Direct Assay
more info
PubMed 
cell wall IDA
Inferred from Direct Assay
more info
PubMed 
chloroplast IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm ISM
Inferred from Sequence Model
more info
 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
NOT cytosol RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
cytosol TAS
Traceable Author Statement
more info
PubMed 
cytosolic ribosome IDA
Inferred from Direct Assay
more info
PubMed 
membrane IDA
Inferred from Direct Assay
more info
PubMed 
nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
plasmodesma IDA
Inferred from Direct Assay
more info
PubMed 
vacuolar membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
heat shock cognate protein 70-1
NP_001119156.1
  • heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_195870.1
  • heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to cold, response to virus, response to heat; LOCATED IN: in 9 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 34264 Blast hits to 33945 proteins in 4852 species: Archae - 163; Bacteria - 16558; Metazoa - 3831; Fungi - 1761; Plants - 1266; Viruses - 306; Other Eukaryotes - 10379 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    553745..556623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120328.5NP_195870.1  heat shock cognate protein 70-1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195870.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P22953
    UniProtKB/TrEMBL
    A0A178UL64
    Conserved Domains (2) summary
    cd10233
    Location:9387
    HSPA1-2_6-8-like_NBD; Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins
    PTZ00009
    Location:5651
    PTZ00009; heat shock 70 kDa protein; Provisional
  2. NM_001125684.1NP_001119156.1  heat shock cognate protein 70-1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001119156.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4KCE5
    Conserved Domains (2) summary
    cd10233
    Location:9387
    HSPA1-2_6-8-like_NBD; Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins
    PTZ00009
    Location:5521
    PTZ00009; heat shock 70 kDa protein; Provisional
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