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AT5G09500 Ribosomal protein S19 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830809, updated on 7-Sep-2023

Summary

Gene symbol
AT5G09500
Gene description
Ribosomal protein S19 family protein
Primary source
Araport:AT5G09500
Locus tag
AT5G09500
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T5E8.300; T5E8_300
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Genomic context

See AT5G09500 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (2953884..2954918, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene Ribosomal protein S19 family protein Neighboring gene Ribosomal protein S19 family protein Neighboring gene miscRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_120987.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
NOT located_in Golgi apparatus RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
 
part_of cytosolic small ribosomal subunit HDA PubMed 

General protein information

Preferred Names
Ribosomal protein S19 family protein
NP_196512.1
  • Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2953884..2954918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120987.3NP_196512.1  Ribosomal protein S19 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196512.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FY65
    UniProtKB/TrEMBL
    A0A178UGP8, A0A5S9Y313, A0A654FZU1, Q0WSM9
    Conserved Domains (1) summary
    PTZ00096
    Location:13148
    PTZ00096; 40S ribosomal protein S15; Provisional