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CPK1 calcium dependent protein kinase 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830366, updated on 7-Sep-2023

Summary

Gene symbol
CPK1
Gene description
calcium dependent protein kinase 1
Primary source
Araport:AT5G04870
Locus tag
AT5G04870
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCPK1; CALCIUM DEPENDENT PROTEIN KINASE; calcium dependent protein kinase 1
Summary
A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense.
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Genomic context

Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (1416564..1420554, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene splicing factor 3A subunit Neighboring gene miscRNA Neighboring gene Glycosyl hydrolase family protein Neighboring gene HSP20-like chaperones superfamily protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_120569.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in membrane NAS
Non-traceable Author Statement
more info
 
located_in peroxisomal membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in peroxisome IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
calcium dependent protein kinase 1
NP_196107.1
  • calcium dependent protein kinase 1 (CPK1); FUNCTIONS IN: protein binding, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: peroxisome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase cdpk isoform 2 (TAIR:AT3G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    1416564..1420554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120569.3NP_196107.1  calcium dependent protein kinase 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196107.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q06850, Q541W0
    UniProtKB/TrEMBL
    A0A178UQJ5, A0A5S9Y215
    Conserved Domains (2) summary
    PTZ00184
    Location:444586
    PTZ00184; calmodulin; Provisional
    cd05117
    Location:149407
    STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases