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yvrJ factor involved in oxalate decarboxylase expression [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 8303113, updated on 13-Aug-2022

Summary

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Gene symbol
yvrJ
Gene description
factor involved in oxalate decarboxylase expression
Locus tag
BSU_33239
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU33239
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Genomic context

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Sequence:
NC_000964.3 (3410007..3410345)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene regulator of sigma-O Neighboring gene alternative sigma factor Neighboring gene oxalate decarboxylase Neighboring gene acid stress-sensitive anti sigma factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
factor involved in oxalate decarboxylase expression
YP_003097788.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 18573182, 19047353; Product type f: factor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003097788.1 factor involved in oxalate decarboxylase expression [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for YP_003097788.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    C0H3R5
    Conserved Domains (1) summary
    pfam12841
    Location:74 → 108
    YvrJ; YvrJ protein family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
C0H3R5.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases