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ER lumen protein retaining receptor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830034, updated on 18-Sep-2024
Official Full Name
ER lumen protein retaining receptor family protein
Primary source
TAIR:AT4G38790
Locus tag
AT4G38790
See related
Araport:AT4G38790
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T9A14.70; T9A14_70
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Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_003075.7 (18111336..18113206)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene proline-rich protein 4 Neighboring gene pre-mRNA-processing-splicing factor-like protein Neighboring gene uncharacterized protein Neighboring gene methylthioadenosine nucleosidase 1 Neighboring gene Calcium-binding EF-hand family protein Neighboring gene ncRNA

Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

NM_120039.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ER retention sequence binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein retention in ER lumen IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
Preferred Names
ER lumen protein retaining receptor family protein
NP_568047.1
  • ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT2G21190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    18111336..18113206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120039.3 → NP_568047.1  ER lumen protein retaining receptor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568047.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UR84, A0A178VM43, A0A5S9X031, Q8LD89
    Conserved Domains (1) summary
    pfam00810
    Location:73 → 216
    ER_lumen_recept; ER lumen protein retaining receptor
Nucleotide Protein
Heading Accession and Version

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