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KLTH0G10560g KLTH0G10560p [ Lachancea thermotolerans CBS 6340 ]

Gene ID: 8294191, updated on 21-Dec-2023

Summary

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Gene symbol
KLTH0G10560g
Gene description
KLTH0G10560p
Locus tag
KLTH0G10560g
Gene type
protein coding
RNA name
KLTH0G10560p
RefSeq status
PROVISIONAL
Organism
Lachancea thermotolerans CBS 6340 (strain: CBS 6340)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea
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Genomic context

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See KLTH0G10560g in Genome Data Viewer
Location:
chromosome: G
Exon count:
1
Sequence:
Chromosome: G; NC_013083.1 (892671..893570)

Chromosome G - NC_013083.1Genomic Context describing neighboring genes Neighboring gene KLTH0G10516p Neighboring gene ncRNA Neighboring gene KLTH0G10582p Neighboring gene KLTH0G10604p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013083.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of protoploid Saccharomycetaceae. Génolevures Consortium, et al. Genome Res, 2009 Oct. PMID 19525356, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
KLTH0G10560p
XP_002555492.1
  • highly similar to uniprot|P47821 Saccharomyces cerevisiae YNL025C SSN8 Component of RNA polymerase II holoenzyme involved in RNA pol II carboxy-terminal domain phosphorylation

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013083.1 Reference assembly

    Range
    892671..893570
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002555446.1 → XP_002555492.1  KLTH0G10560p [Lachancea thermotolerans CBS 6340]

    See identical proteins and their annotated locations for XP_002555492.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5DMP4
    Conserved Domains (2) summary
    COG5333
    Location:28 → 298
    CCL1; Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
    cl00050
    Location:54 → 174
    CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...
Nucleotide Protein
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