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KLTH0F11924g KLTH0F11924p [ Lachancea thermotolerans CBS 6340 ]

Gene ID: 8292930, updated on 11-Apr-2024

Summary

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Gene symbol
KLTH0F11924g
Gene description
KLTH0F11924p
Locus tag
KLTH0F11924g
Gene type
protein coding
RNA name
KLTH0F11924p
RefSeq status
PROVISIONAL
Organism
Lachancea thermotolerans CBS 6340 (strain: CBS 6340)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea
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Genomic context

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Location:
chromosome: F
Exon count:
1
Sequence:
Chromosome: F; NC_013082.1 (1003953..1004627)

Chromosome F - NC_013082.1Genomic Context describing neighboring genes Neighboring gene KLTH0F11880p Neighboring gene KLTH0F11902p Neighboring gene KLTH0F11946p Neighboring gene KLTH0F11968p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013082.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of protoploid Saccharomycetaceae. Génolevures Consortium, et al. Genome Res, 2009 Oct. PMID 19525356, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in U4 snRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear mRNA surveillance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in poly(A)-dependent snoRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
KLTH0F11924p
XP_002554716.1
  • similar to uniprot|P53256 Saccharomyces cerevisiae YGR095C RRP46 Ribosomal RNA Processing Putative 3'->5' exoribonuclease component of exosome complex of 3'- >5' exonucleases

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013082.1 Reference assembly

    Range
    1003953..1004627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002554670.1 → XP_002554716.1  KLTH0F11924p [Lachancea thermotolerans CBS 6340]

    See identical proteins and their annotated locations for XP_002554716.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5DLC8
    Conserved Domains (2) summary
    cd11372
    Location:1 → 209
    RNase_PH_RRP46; RRP46 subunit of eukaryotic exosome
    COG0689
    Location:2 → 212
    Rph; Ribonuclease PH [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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