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intracellular protein transporter [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828872, updated on 18-Sep-2024
Official Full Name
intracellular protein transporter
Primary source
TAIR:AT4G27610
Locus tag
AT4G27610
See related
Araport:AT4G27610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T29A15.100; T29A15_100
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Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_003075.7 (13785395..13788516, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pfkB-like carbohydrate kinase family protein Neighboring gene ncRNA Neighboring gene intracellular protein transporter Neighboring gene GPCR-type G protein 2

Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

NM_001084984.2
NM_001341866.1
NM_001341867.1
NM_001341868.1
NM_001341869.1
NM_001341870.1
NM_118897.3
NM_179127.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
Preferred Names
intracellular protein transporter
NP_001078453.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27620.2); Has 1304 Blast hits to 1173 proteins in 200 species: Archae - 14; Bacteria - 115; Metazoa - 628; Fungi - 104; Plants - 95; Viruses - 8; Other Eukaryotes - 340 (source: NCBI BLink).
NP_194491.2
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27620.2); Has 1304 Blast hits to 1173 proteins in 200 species: Archae - 14; Bacteria - 115; Metazoa - 628; Fungi - 104; Plants - 95; Viruses - 8; Other Eukaryotes - 340 (source: NCBI BLink).
NP_849458.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27620.2); Has 1304 Blast hits to 1173 proteins in 200 species: Archae - 14; Bacteria - 115; Metazoa - 628; Fungi - 104; Plants - 95; Viruses - 8; Other Eukaryotes - 340 (source: NCBI BLink).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13785395..13788516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001341865.1 → NP_001329629.1  intracellular protein transporter [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V5U3, A0A384KM28, Q0WMP0, Q84JD6
    Conserved Domains (1) summary
    PRK09039
    Location:179 → 324
    PRK09039; peptidoglycan -binding protein

  2. NM_179127.2 → NP_849458.1  intracellular protein transporter [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849458.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V5U3, A0A384KM28, Q0WMP0, Q84JD6
    Conserved Domains (1) summary
    PRK09039
    Location:179 → 324
    PRK09039; peptidoglycan -binding protein

  3. NM_118897.3 → NP_194491.2  intracellular protein transporter [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194491.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V5U3, A0A384KM28, Q0WMP0, Q84JD6
    Conserved Domains (1) summary
    PRK09039
    Location:179 → 324
    PRK09039; peptidoglycan -binding protein

  4. NM_001341866.1 → NP_001329628.1  intracellular protein transporter [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V5U3, A0A384KM28, Q0WMP0, Q84JD6
    Conserved Domains (1) summary
    PRK09039
    Location:179 → 324
    PRK09039; peptidoglycan -binding protein

  5. NM_001084984.2 → NP_001078453.1  intracellular protein transporter [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078453.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V5U3, A0A384KM28, Q0WMP0, Q84JD6
    Conserved Domains (1) summary
    PRK09039
    Location:179 → 324
    PRK09039; peptidoglycan -binding protein

  6. NM_001341867.1 → NP_001329627.1  intracellular protein transporter [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V5U3, A0A384KM28, Q0WMP0, Q84JD6
    Conserved Domains (1) summary
    PRK09039
    Location:179 → 324
    PRK09039; peptidoglycan -binding protein

  7. NM_001341869.1 → NP_001329624.1  intracellular protein transporter [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V5U3, A0A384KM28, Q0WMP0, Q84JD6
    Conserved Domains (1) summary
    PRK09039
    Location:179 → 324
    PRK09039; peptidoglycan -binding protein

  8. NM_001341870.1 → NP_001329625.1  intracellular protein transporter [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V5U3, A0A384KM28, Q0WMP0, Q84JD6
    Conserved Domains (1) summary
    PRK09039
    Location:179 → 324
    PRK09039; peptidoglycan -binding protein

  9. NM_001341868.1 → NP_001329626.1  intracellular protein transporter [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V5U3, A0A384KM28, Q0WMP0, Q84JD6
    Conserved Domains (1) summary
    PRK09039
    Location:179 → 324
    PRK09039; peptidoglycan -binding protein
Nucleotide Protein
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