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ORP2A OSBP(oxysterol binding protein)-related protein 2A [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828349, updated on 11-Oct-2018

Summary

Gene symbol
ORP2A
Gene description
OSBP(oxysterol binding protein)-related protein 2A
Primary source
Araport:AT4G22540
Locus tag
AT4G22540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F7K2.120; F7K2_120; OSBP(oxysterol binding protein)-related protein 2A

Genomic context

See ORP2A in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Sequence:
Chromosome: 4; NC_003075.7 (11860409..11866475, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene miscRNA Neighboring gene Phosphatidic acid phosphatase (PAP2) family protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

NM_001036621.3
NM_001203871.1
NM_001341552.1
NM_001341553.1
NM_118380.3
NM_202863.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
lipid binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
oxysterol binding ISS
Inferred from Sequence or Structural Similarity
more info
 
phosphatidylinositol binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
sterol binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
sterol transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
steroid metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
OSBP(oxysterol binding protein)-related protein 2A
NP_001031698.1
  • OSBP(oxysterol binding protein)-related protein 2A (ORP2A); CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 2B (TAIR:AT4G12460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_001190800.1
  • OSBP(oxysterol binding protein)-related protein 2A (ORP2A); CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 2B (TAIR:AT4G12460.1).
NP_567662.1
  • OSBP(oxysterol binding protein)-related protein 2A (ORP2A); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 2B (TAIR:AT4G12460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_974592.1
  • OSBP(oxysterol binding protein)-related protein 2A (ORP2A); CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 2B (TAIR:AT4G12460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    11860409..11866475 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118380.3NP_567662.1  OSBP(oxysterol binding protein)-related protein 2A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567662.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q940Y1
    UniProtKB/TrEMBL
    A0A178UYT2
    Conserved Domains (3) summary
    cd13294
    Location:53185
    PH_ORP_plant; Plant Oxysterol binding protein related protein Pleckstrin homology (PH) domain
    pfam00169
    Location:55172
    PH; PH domain
    pfam01237
    Location:344696
    Oxysterol_BP; Oxysterol-binding protein
  2. NM_001341552.1NP_001328217.1  OSBP(oxysterol binding protein)-related protein 2A [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q940Y1
    UniProtKB/TrEMBL
    A0A178UYT2
  3. NM_001341553.1NP_001328218.1  OSBP(oxysterol binding protein)-related protein 2A [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q940Y1
  4. NM_001203871.1NP_001190800.1  OSBP(oxysterol binding protein)-related protein 2A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190800.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q940Y1
    Conserved Domains (1) summary
    pfam01237
    Location:133485
    Oxysterol_BP; Oxysterol-binding protein
  5. NM_202863.3NP_974592.1  OSBP(oxysterol binding protein)-related protein 2A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974592.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q940Y1
    Conserved Domains (1) summary
    pfam01237
    Location:133485
    Oxysterol_BP; Oxysterol-binding protein
  6. NM_001036621.3NP_001031698.1  OSBP(oxysterol binding protein)-related protein 2A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031698.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q940Y1
    Conserved Domains (1) summary
    pfam01237
    Location:133485
    Oxysterol_BP; Oxysterol-binding protein
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