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STP12 sugar transporter protein 12 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828233, updated on 11-Oct-2018

Summary

Gene symbol
STP12
Gene description
sugar transporter protein 12
Primary source
Araport:AT4G21480
Locus tag
AT4G21480
Gene type
protein coding
RNA name
sugar transporter protein 12
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F18E5.100; F18E5_100; sugar transporter protein 12
Summary
Putative sugar transporter. Expressed in nematode-induced root syncytia.

Genomic context

See STP12 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (11433303..11435284, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene PapD-like superfamily protein Neighboring gene Ribosomal protein S24/S35 Neighboring gene riboflavin kinase/FMN hydrolase Neighboring gene NAD(P)H dehydrogenase B3 Neighboring gene ncRNA Neighboring gene transmembrane protein

General gene information

Homology

NM_118268.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
carbohydrate transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
carbohydrate:proton symporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
carbohydrate:proton symporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
monosaccharide transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
symporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
carbohydrate transport IEA
Inferred from Electronic Annotation
more info
 
monosaccharide transmembrane transport IDA
Inferred from Direct Assay
more info
PubMed 
response to nematode IEP
Inferred from Expression Pattern
more info
PubMed 
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
sugar transporter protein 12
NP_193879.4
  • sugar transporter protein 12 (STP12); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter 1 (TAIR:AT1G11260.1); Has 29334 Blast hits to 28788 proteins in 2015 species: Archae - 490; Bacteria - 14513; Metazoa - 3914; Fungi - 6644; Plants - 2469; Viruses - 2; Other Eukaryotes - 1302 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    11433303..11435284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118268.4NP_193879.4  sugar transporter protein 12 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193879.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65413
    UniProtKB/TrEMBL
    A0A178V2V7
    Conserved Domains (2) summary
    cd06174
    Location:77473
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam00083
    Location:27487
    Sugar_tr; Sugar (and other) transporter
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