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NET1B kinase interacting (KIP1-like) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827131, updated on 15-Feb-2024

Summary

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Gene symbol
NET1B
Gene description
kinase interacting (KIP1-like) family protein
Primary source
Araport:AT4G14760
Locus tag
AT4G14760
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DL3420W; FCAALL.305; Networked 1B
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_003075.7 (8474776..8481349)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene IQ-domain 19 Neighboring gene TESMIN/TSO1-like CXC 2 Neighboring gene Protein kinase superfamily protein Neighboring gene SCR-like 23 Neighboring gene ATP-dependent RNA helicase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Arabidopsis nuclear proteome and its response to cold stress. Bae MS, et al. Plant J, 2003 Dec. PMID 14617066
  2. A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Waidmann S, et al. Plant Cell, 2014 Nov. PMID 25387881, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198
  4. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001340969.1
NM_117561.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
kinase interacting (KIP1-like) family protein
NP_193212.4
  • kinase interacting (KIP1-like) family protein; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT3G22790.1); Has 202368 Blast hits to 81555 proteins in 3405 species: Archae - 2925; Bacteria - 38097; Metazoa - 89489; Fungi - 15183; Plants - 10947; Viruses - 841; Other Eukaryotes - 44886 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    8474776..8481349
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001340967.1 → NP_001329579.1  kinase interacting (KIP1-like) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JIF4, O23332
    UniProtKB/TrEMBL
    A0A178V0B5, A0A5S9XSP6

  2. NM_001340968.1 → NP_001329578.1  kinase interacting (KIP1-like) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JIF4, O23332
    UniProtKB/TrEMBL
    A0A178V0B5, A0A5S9XSP6

  3. NM_117561.6 → NP_193212.4  kinase interacting (KIP1-like) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193212.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JIF4, O23332
    UniProtKB/TrEMBL
    A0A178V0B5, A0A5S9XSP6
    Conserved Domains (3) summary
    COG1196
    Location:605 → 1351
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam07765
    Location:14 → 86
    KIP1; KIP1-like protein
    pfam15905
    Location:137 → 431
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  4. NM_001340969.1 → NP_001329577.1  kinase interacting (KIP1-like) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JIF4, O23332
    UniProtKB/TrEMBL
    A0A178V0B5, A0A5S9XSP6
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4JIF4.1

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