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transcription initiation factor TFIID subunit (Protein of unknown function, DUF584) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823657, updated on 18-Sep-2024
Official Full Name
transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
Primary source
TAIR:AT3G45210
Locus tag
AT3G45210
See related
Araport:AT3G45210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (16556684..16558169, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Serine protease inhibitor (SERPIN) family protein Neighboring gene hydroxyproline-rich glycoprotein family protein

Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description
NM_114390.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
Preferred Names
transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
NP_190107.1
  • Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT5G60680.1); Has 332 Blast hits to 332 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 332; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    16556684..16558169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114390.3 → NP_190107.1  transcription initiation factor TFIID subunit (Protein of unknown function, DUF584) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190107.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VBZ7, A0A5S9XHZ1, Q9M1T8
    Conserved Domains (1) summary
    pfam04520
    Location:74 → 148
    Senescence_reg; Senescence regulator
Nucleotide Protein
Heading Accession and Version

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