Format

Send to:

Choose Destination

JAZ11 jasmonate-zim-domain protein 11 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823426, updated on 6-May-2021

Summary

Gene symbol
JAZ11
Gene description
jasmonate-zim-domain protein 11
Primary source
Araport:AT3G43440
Locus tag
AT3G43440
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
jasmonate-zim-domain protein 11; TIFY3A
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See JAZ11 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Sequence:
Chromosome: 3; NC_003074.8 (15367546..15370157)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001203078.1
NM_114212.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in regulation of defense response IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in regulation of jasmonic acid mediated signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in response to wounding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
jasmonate-zim-domain protein 11
NP_001190007.1
  • jasmonate-zim-domain protein 11 (JAZ11); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 12 (TAIR:AT5G20900.1).
NP_189930.1
  • jasmonate-zim-domain protein 11 (JAZ11); CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 12 (TAIR:AT5G20900.1); Has 581 Blast hits to 344 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 581; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    15367546..15370157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114212.5NP_189930.1  jasmonate-zim-domain protein 11 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189930.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M246
    Conserved Domains (2) summary
    smart00979
    Location:125160
    TIFY; This short possible domain is found in a variety of plant transcription factors that contain GATA domains as well as other motifs
    pfam09425
    Location:197221
    CCT_2; Divergent CCT motif
  2. NM_001203078.1NP_001190007.1  jasmonate-zim-domain protein 11 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190007.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IZ48
    Conserved Domains (2) summary
    smart00979
    Location:3974
    TIFY; This short possible domain is found in a variety of plant transcription factors that contain GATA domains as well as other motifs
    pfam09425
    Location:111135
    CCT_2; Divergent CCT motif
Support Center