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ZYRO0F11440g hypothetical protein [ Zygosaccharomyces rouxii ]

Gene ID: 8205462, updated on 21-Dec-2023

Summary

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Gene symbol
ZYRO0F11440g
Gene description
hypothetical protein
Locus tag
ZYRO0F11440g
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Zygosaccharomyces rouxii (strain: CBS 732)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces
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Genomic context

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See ZYRO0F11440g in Genome Data Viewer
Location:
chromosome: F
Exon count:
1
Sequence:
Chromosome: F; NC_012995.1 (939613..941184)

Chromosome F - NC_012995.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012995.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of protoploid Saccharomycetaceae. Génolevures Consortium, et al. Genome Res, 2009 Oct. PMID 19525356, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in P-body assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in stress granule assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_002497696.1
  • highly similar to uniprot|Q75BS4 Ashbya gossypii ACR197W DHH1 ATP-dependent RNA helicase DHH1 and similar to YDL160C uniprot|P39517 Saccharomyces cerevisiae YDL160C DHH1 Cytoplasmic DExD/H-box helicase stimulates mRNA decapping coordinates distinct steps in mRNA function and decay interacts with both the decapping and deadenylase complexes may have a role in mRNA export and translation

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012995.1 Reference assembly

    Range
    939613..941184
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002497651.1 → XP_002497696.1  uncharacterized protein ZYRO0F11440g [Zygosaccharomyces rouxii]

    See identical proteins and their annotated locations for XP_002497696.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1Q3A3G3, C5DYA2
    Conserved Domains (2) summary
    COG0513
    Location:31 → 390
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    pfam15240
    Location:437 → 522
    Pro-rich; Proline-rich
Nucleotide Protein
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