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ZYRO0E08360g hypothetical protein [ Zygosaccharomyces rouxii ]

Gene ID: 8204844, updated on 21-Dec-2023

Summary

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Gene symbol
ZYRO0E08360g
Gene description
hypothetical protein
Locus tag
ZYRO0E08360g
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Zygosaccharomyces rouxii (strain: CBS 732)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces
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Genomic context

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Location:
chromosome: E
Exon count:
1
Sequence:
Chromosome: E; NC_012994.1 (662545..667491)

Chromosome E - NC_012994.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012994.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of protoploid Saccharomycetaceae. Génolevures Consortium, et al. Genome Res, 2009 Oct. PMID 19525356, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin light chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi to endosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cortical patch IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of clathrin coat of coated pit IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of clathrin coat of trans-Golgi network vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of clathrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_002499289.1
  • highly similar to uniprot|P22137 Saccharomyces cerevisiae YGL206C CHC1 vesicle coat protein presumed vesicle coat protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012994.1 Reference assembly

    Range
    662545..667491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002499244.1 → XP_002499289.1  uncharacterized protein ZYRO0E08360g [Zygosaccharomyces rouxii]

    See identical proteins and their annotated locations for XP_002499289.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1Q3A1T8, C5E4S3
    Conserved Domains (5) summary
    smart00299
    Location:1279 → 1421
    CLH; Clathrin heavy chain repeat homology
    pfam01394
    Location:151 → 188
    Clathrin_propel; Clathrin propeller repeat
    pfam00637
    Location:984 → 1122
    Clathrin; Region in Clathrin and VPS
    pfam09268
    Location:337 → 359
    Clathrin-link; Clathrin, heavy-chain linker
    pfam13838
    Location:361 → 424
    Clathrin_H_link; Clathrin-H-link
Nucleotide Protein
Heading Accession and Version

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