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AT3G11630 Thioredoxin superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820335, updated on 12-Aug-2018

Summary

Gene symbol
AT3G11630
Gene description
Thioredoxin superfamily protein
Primary source
Araport:AT3G11630
Locus tag
AT3G11630
Gene type
protein coding
RNA name
Thioredoxin superfamily protein
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T19F11.3
Summary
Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues.

Genomic context

See AT3G11630 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Sequence:
Chromosome: 3; NC_003074.8 (3672036..3674159)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene bric-a-brac protein Neighboring gene ncRNA Neighboring gene E3 ubiquitin-protein ligase Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene transmembrane protein Neighboring gene NDR1/HIN1-like 2

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

NM_111995.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
antioxidant activity ISS
Inferred from Sequence or Structural Similarity
more info
 
peroxidase activity IDA
Inferred from Direct Assay
more info
PubMed 
peroxiredoxin activity IDA
Inferred from Direct Assay
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
thioredoxin peroxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
cell redox homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
defense response to bacterium IEP
Inferred from Expression Pattern
more info
PubMed 
hydrogen peroxide catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
response to cold IEP
Inferred from Expression Pattern
more info
PubMed 
response to oxidative stress IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
apoplast IDA
Inferred from Direct Assay
more info
PubMed 
chloroplast IDA
Inferred from Direct Assay
more info
PubMed 
chloroplast ISM
Inferred from Sequence Model
more info
 
chloroplast envelope IDA
Inferred from Direct Assay
more info
PubMed 
chloroplast stroma IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
chloroplast stroma IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
NOT cytosol RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
stromule IDA
Inferred from Direct Assay
more info
PubMed 
thylakoid IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Thioredoxin superfamily protein
NP_187769.1
  • Thioredoxin superfamily protein; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1); Has 16794 Blast hits to 16794 proteins in 2739 species: Archae - 621; Bacteria - 10920; Metazoa - 1157; Fungi - 359; Plants - 398; Viruses - 0; Other Eukaryotes - 3339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3672036..3674159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111995.3NP_187769.1  Thioredoxin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187769.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q96291
    UniProtKB/TrEMBL
    A0A178VJT2
    Conserved Domains (2) summary
    COG0450
    Location:72265
    AhpC; Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin) [Defense mechanisms]
    cd03015
    Location:75248
    PRX_Typ2cys; Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. ...
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