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EMB2804 tubulin folding cofactor B [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820184, updated on 7-Sep-2023

Summary

Gene symbol
EMB2804
Gene description
tubulin folding cofactor B
Primary source
Araport:AT3G10220
Locus tag
AT3G10220
See related
TAIR:AT3G10220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
EMBRYO DEFECTIVE 2804
Summary
Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division.
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Genomic context

See EMB2804 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Sequence:
Chromosome: 3; NC_003074.8 (3161706..3164231)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Putative membrane lipoprotein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein Neighboring gene ncRNA Neighboring gene lycopene cyclase Neighboring gene ncRNA Neighboring gene F-box and associated interaction domains-containing protein

General protein information

Preferred Names
tubulin folding cofactor B
NP_187633.2
  • tubulin folding cofactor B; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tubulin complex assembly, embryo development, cell division; LOCATED IN: nucleus, cytoplasm, phragmoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 1750 Blast hits to 1417 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 1247; Fungi - 285; Plants - 70; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3161706..3164231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111857.5NP_187633.2  tubulin folding cofactor B [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187633.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q67XW4, Q67Z52, Q8L5R5, Q9SS34
    UniProtKB/TrEMBL
    A0A178VKX4, A0A5S9XB09, A0A654F5P2
    Conserved Domains (2) summary
    smart01052
    Location:161228
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    pfam14560
    Location:1496
    Ubiquitin_2; Ubiquitin-like domain