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AT3G09440 Heat shock protein 70 (Hsp 70) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820102, updated on 7-Sep-2023

Summary

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Gene symbol
AT3G09440
Gene description
Heat shock protein 70 (Hsp 70) family protein
Primary source
Araport:AT3G09440
Locus tag
AT3G09440
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See AT3G09440 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (2902355..2905947, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pol-like 3 Neighboring gene Pectinacetylesterase family protein Neighboring gene Pectinacetylesterase family protein Neighboring gene peptide transporter family protein Neighboring gene ncRNA Neighboring gene fusaric acid resistance family protein Neighboring gene dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cytosolic HSC70s repress heat stress tolerance and enhance seed germination under salt stress conditions. Zhao H, et al. Plant Cell Environ, 2021 Jun. PMID 33506954
  2. Heat shock 70 protein interaction with Turnip mosaic virus RNA-dependent RNA polymerase within virus-induced membrane vesicles. Dufresne PJ, et al. Virology, 2008 Apr 25. PMID 18222516
  3. A proteomic study of the arabidopsis nuclear matrix. Calikowski TT, et al. J Cell Biochem, 2003 Oct 1. PMID 14505352
  4. Virus induction of heat shock protein 70 reflects a general response to protein accumulation in the plant cytosol. Aparicio F, et al. Plant Physiol, 2005 May. PMID 15805473, Free PMC Article
  5. Opposing Effects on Two Phases of Defense Responses from Concerted Actions of HEAT SHOCK COGNATE70 and BONZAI1 in Arabidopsis. Gou M, et al. Plant Physiol, 2015 Nov. PMID 26408532, Free PMC Article

See all (34) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Cytosolic HSC70s repress heat stress tolerance and enhance seed germination under salt stress conditions.
    Title: Cytosolic HSC70s repress heat stress tolerance and enhance seed germination under salt stress conditions.
  2. Thus, Hsc70-3 and PABP2 are potentially integral components of the replicase complex and could have important roles to play in the regulation of potyviral RdRp functions.
    Title: Heat shock 70 protein interaction with Turnip mosaic virus RNA-dependent RNA polymerase within virus-induced membrane vesicles.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001202918.1
NM_001337820.1
NM_111778.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
  
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protease binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within protein folding TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within response to heat IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to heat IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to virus IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in apoplast HDA PubMed 
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytoplasmic stress granule IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol HDA PubMed 
located_in cytosol TAS
Traceable Author Statement
more info
 PubMed 
located_in cytosolic ribosome HDA PubMed 
located_in nuclear matrix IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plant-type cell wall HDA PubMed 
located_in plant-type vacuole HDA PubMed 
located_in plasma membrane HDA PubMed 
located_in plasmodesma HDA PubMed 
located_in vacuole HDA PubMed 

General protein information

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Preferred Names
Heat shock protein 70 (Hsp 70) family protein
NP_001319509.1
  • Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to karrikin, response to heat; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34172 Blast hits to 33801 proteins in 4833 species: Archae - 161; Bacteria - 16465; Metazoa - 3857; Fungi - 1750; Plants - 1254; Viruses - 309; Other Eukaryotes - 10376 (source: NCBI BLink).
NP_001319510.1
  • Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to karrikin, response to heat; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    2902355..2905947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001337819.1 → NP_001319509.1  Heat shock protein 70 (Hsp 70) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65719, Q42345, Q56WH5, Q96267
    UniProtKB/TrEMBL
    A0A178VI76, A0A5S9XAN9
    Conserved Domains (1) summary
    PTZ00009
    Location:5 → 649
    PTZ00009; heat shock 70 kDa protein; Provisional

  2. NM_001337820.1 → NP_001319510.1  Heat shock protein 70 (Hsp 70) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65719, Q42345, Q56WH5, Q96267
    UniProtKB/TrEMBL
    A0A178VI76, A0A5S9XAN9
    Conserved Domains (1) summary
    PTZ00009
    Location:5 → 649
    PTZ00009; heat shock 70 kDa protein; Provisional

  3. NM_001202918.1 → NP_001189847.1  Heat shock protein 70 (Hsp 70) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189847.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65719, Q42345, Q56WH5, Q96267
    UniProtKB/TrEMBL
    A0A178VI76, A0A5S9XAN9
    Conserved Domains (1) summary
    PTZ00009
    Location:5 → 649
    PTZ00009; heat shock 70 kDa protein; Provisional

  4. NM_111778.4 → NP_187555.1  Heat shock protein 70 (Hsp 70) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187555.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65719, Q42345, Q56WH5, Q96267
    UniProtKB/TrEMBL
    A0A178VI76, A0A5S9XAN9
    Conserved Domains (1) summary
    PTZ00009
    Location:5 → 649
    PTZ00009; heat shock 70 kDa protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O65719.1

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