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PAS_chr4_0212 Ribose-5-phosphate ketol-isomerase [ Komagataella phaffii GS115 ]

Gene ID: 8200883, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0212
Gene description
Ribose-5-phosphate ketol-isomerase
Locus tag
PAS_chr4_0212
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr4_0212 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_012966.1 (428135..428873)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene 40S ribosomal protein S7 Neighboring gene Ribose-5-phosphate ketol-isomerase Neighboring gene Glucose-repressible ADP-ribosylation factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribose-5-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-ribose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Ribose-5-phosphate ketol-isomerase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    428135..428873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002493572.1 → XP_002493617.1  Ribose-5-phosphate ketol-isomerase [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002493617.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1G4KQZ7, C4R763
    Conserved Domains (1) summary
    cd01398
    Location:9 → 201
    RPI_A; RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. This reaction leads to the ...
Nucleotide Protein
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