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PAS_chr3_0140 ER localized, heme-binding peroxidase involved in the degradation of heme [ Komagataella phaffii GS115 ]

Gene ID: 8199419, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr3_0140
Gene description
ER localized, heme-binding peroxidase involved in the degradation of heme
Locus tag
PAS_chr3_0140
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr3_0140 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_012965.1 (280750..281607)

Chromosome 3 - NC_012965.1Genomic Context describing neighboring genes Neighboring gene Hypothetical protein Neighboring gene Hypothetical protein Neighboring gene uncharacterized protein Neighboring gene High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012965.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme oxygenase (decyclizing) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heme oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ER localized, heme-binding peroxidase involved in the degradation of heme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012965.1 Reference assembly

    Range
    280750..281607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002492303.1 → XP_002492348.1  ER localized, heme-binding peroxidase involved in the degradation of heme [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002492348.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R3N3, F2QXB2
    Conserved Domains (1) summary
    cl15243
    Location:20 → 241
    HemeO; Heme oxygenase catalyzes the rate limiting step in the degradation of heme to bilirubin, it is essential for recycling of iron from heme. Heme is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This ...
Nucleotide Protein
Heading Accession and Version

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