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ACLB-1 ATP-citrate lyase B-1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819845, updated on 7-Sep-2023

Summary

Gene symbol
ACLB-1
Gene description
ATP-citrate lyase B-1
Primary source
Araport:AT3G06650
Locus tag
AT3G06650
See related
TAIR:AT3G06650
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATP-citrate lyase B-1; T8E24.7; T8E24_7
Summary
One of the two genes encoding subunit B of the trimeric enzyme ATP Citrate lyase
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Genomic context

See ACLB-1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Sequence:
Chromosome: 3; NC_003074.8 (2079033..2083472, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein kinase family protein Neighboring gene PAS domain-containing protein tyrosine kinase family protein Neighboring gene fip1 motif-containing protein Neighboring gene Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein Neighboring gene AGAMOUS-like 91

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001337675.1
NM_111541.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP citrate synthase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within acetyl-CoA biosynthetic process TAS
Traceable Author Statement
more info
PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of ATP-dependent citrate lyase complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
 
located_in cytosol HDA PubMed 

General protein information

Preferred Names
ATP-citrate lyase B-1
NP_187317.1
  • ATP-citrate lyase B-1 (ACLB-1); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: citrate lyase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), CoA-binding (InterPro:IPR003781), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP citrate lyase subunit B 2 (TAIR:AT5G49460.1); Has 8069 Blast hits to 8065 proteins in 2074 species: Archae - 271; Bacteria - 4029; Metazoa - 557; Fungi - 289; Plants - 162; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    2079033..2083472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111541.4NP_187317.1  ATP-citrate lyase B-1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187317.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C522
    UniProtKB/TrEMBL
    A0A178V742, A0A5S9X9R7, A0A7G2FJB4
    Conserved Domains (1) summary
    PLN02522
    Location:1608
    PLN02522; ATP citrate (pro-S)-lyase
  2. NM_001337675.1NP_001326324.1  ATP-citrate lyase B-1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C522
    UniProtKB/TrEMBL
    A0A178V742, A0A5S9X9R7, A0A7G2FJB4
    Conserved Domains (1) summary
    PLN02522
    Location:1608
    PLN02522; ATP citrate (pro-S)-lyase