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NIP7;1 NOD26-like intrinsic protein 7;1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819783, updated on 11-Oct-2018

Summary

Gene symbol
NIP7;1
Gene description
NOD26-like intrinsic protein 7;1
Primary source
Araport:AT3G06100
Locus tag
AT3G06100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F28L1.3; F28L1_3; NLM6; NLM8; NOD26-like intrinsic protein 7;1; NOD26-LIKE MIP 6; NOD26-LIKE MIP 8
Summary
Encodes NIP7;1, an anther-specific boric acid transporter of the aquaporin superfamily regulated by an unusual tyrosine in helix 2 of the transport pore.

Genomic context

See NIP7;1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (1841168..1843196, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene trichome birefringence-like protein (DUF828) Neighboring gene hypothetical protein Neighboring gene transmembrane protein Neighboring gene tRNA Neighboring gene MAPK phosphatase 2

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

NM_001337632.1
NM_001337633.1
NM_111485.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
active borate transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
channel activity IEA
Inferred from Electronic Annotation
more info
 
water channel activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
borate transmembrane transport IDA
Inferred from Direct Assay
more info
PubMed 
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
extracellular region ISM
Inferred from Sequence Model
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
NOD26-like intrinsic protein 7;1
NP_566271.1
  • NOD26-like intrinsic protein 7;1 (NIP7;1); FUNCTIONS IN: water channel activity; INVOLVED IN: transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 10571 Blast hits to 10316 proteins in 2159 species: Archae - 111; Bacteria - 5379; Metazoa - 1383; Fungi - 439; Plants - 2077; Viruses - 4; Other Eukaryotes - 1178 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    1841168..1843196 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111485.3NP_566271.1  NOD26-like intrinsic protein 7;1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566271.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LAI1
    UniProtKB/TrEMBL
    A0A178V7E3
    Conserved Domains (1) summary
    PLN00183
    Location:1275
    PLN00183; putative aquaporin NIP7; Provisional
  2. NM_001337632.1NP_001327693.1  NOD26-like intrinsic protein 7;1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LT38
  3. NM_001337633.1NP_001327692.1  NOD26-like intrinsic protein 7;1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LT37
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