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GRF9 general regulatory factor 9 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818859, updated on 11-Oct-2018

Summary

Gene symbol
GRF9
Gene description
general regulatory factor 9
Primary source
Araport:AT2G42590
Locus tag
AT2G42590
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14N22.14; F14N22_14; general regulatory factor 9; GF14 MU
Summary
14-3-3 gene. Binds calcium and displays induced structural changes.

Genomic context

See GRF9 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (17731830..17733982, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene late embryogenesis abundant domain-containing protein / LEA domain-containing protein Neighboring gene TRICHOME BIREFRINGENCE-LIKE 39 Neighboring gene tetratricopetide-repeat thioredoxin-like 3 Neighboring gene phosphoenolpyruvate carboxylase 2 Neighboring gene LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001036455.1
NM_001036456.1
NM_129820.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
calcium ion binding IDA
Inferred from Direct Assay
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein phosphorylated amino acid binding TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
post-embryonic root development IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
chloroplast stroma IDA
Inferred from Direct Assay
more info
PubMed 
chloroplast stroma IPI
Inferred from Physical Interaction
more info
PubMed 
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoplasm ISM
Inferred from Sequence Model
more info
 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
general regulatory factor 9
NP_001031532.1
  • general regulatory factor 9 (GRF9); FUNCTIONS IN: protein phosphorylated amino acid binding, calcium ion binding; LOCATED IN: chloroplast stroma, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_001031533.1
  • general regulatory factor 9 (GRF9); FUNCTIONS IN: protein phosphorylated amino acid binding, calcium ion binding; LOCATED IN: chloroplast stroma, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_565977.1
  • general regulatory factor 9 (GRF9); FUNCTIONS IN: protein phosphorylated amino acid binding, calcium ion binding; LOCATED IN: chloroplast stroma, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 12 (TAIR:AT1G26480.1); Has 2711 Blast hits to 2702 proteins in 385 species: Archae - 0; Bacteria - 4; Metazoa - 1258; Fungi - 332; Plants - 762; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17731830..17733982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129820.3NP_565977.1  general regulatory factor 9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565977.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q96299
    UniProtKB/TrEMBL
    A0A178VYW7
    Conserved Domains (1) summary
    pfam00244
    Location:11237
    14-3-3; 14-3-3 protein
  2. NM_001036455.1NP_001031532.1  general regulatory factor 9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031532.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IP53
    Conserved Domains (1) summary
    pfam00244
    Location:11237
    14-3-3; 14-3-3 protein
  3. NM_001036456.1NP_001031533.1  general regulatory factor 9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031533.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IP55
    Conserved Domains (1) summary
    pfam00244
    Location:11237
    14-3-3; 14-3-3 protein
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