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MTPB1 metal tolerance protein B1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817490, updated on 15-Oct-2023

Summary

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Gene symbol
MTPB1
Gene description
metal tolerance protein B1
Primary source
Araport:AT2G29410
Locus tag
AT2G29410
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATMTPB1; F16P2.21; F16P2_21; metal tolerance protein B1
Summary
member of Zinc transporter (ZAT) family
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (12616378..12617987)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene sterol 4-alpha-methyl-oxidase 2-2 Neighboring gene type one protein phosphatase 1 Neighboring gene ncRNA Neighboring gene glutathione S-transferase tau 7 Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_128495.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables inorganic anion transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables monoatomic cation transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
metal tolerance protein B1
NP_180502.2
  • metal tolerance protein B1 (MTPB1); FUNCTIONS IN: efflux transmembrane transporter activity, zinc ion transmembrane transporter activity, inorganic anion transmembrane transporter activity; INVOLVED IN: zinc ion transport, cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: zinc transporter of Arabidopsis thaliana (TAIR:AT2G46800.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    12616378..12617987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128495.4 → NP_180502.2  metal tolerance protein B1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180502.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6DBM8, Q9ZW23
    UniProtKB/TrEMBL
    A0A654EX78
    Conserved Domains (2) summary
    TIGR01297
    Location:67 → 375
    CDF; cation diffusion facilitator family transporter
    pfam01545
    Location:67 → 296
    Cation_efflux; Cation efflux family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6DBM8.1

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