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ATCOAE dephospho-CoA kinase family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817294, updated on 7-Sep-2023

Summary

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Gene symbol
ATCOAE
Gene description
dephospho-CoA kinase family
Primary source
Araport:AT2G27490
Locus tag
AT2G27490
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F10A12.17; F10A12_17
Summary
AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Sequence:
Chromosome: 2; NC_003071.7 (11748015..11750488, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene sec23/sec24 transport family protein Neighboring gene nuclear factor Y, subunit B11 Neighboring gene ncRNA Neighboring gene Calcium-binding EF-hand family protein Neighboring gene miscRNA Neighboring gene Glycosyl hydrolase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. 4'-phosphopantetheine and coenzyme A biosynthesis in plants. Kupke T, et al. J Biol Chem, 2003 Oct 3. PMID 12860978
  2. In-depth proteome analysis of Arabidopsis leaf peroxisomes combined with in vivo subcellular targeting verification indicates novel metabolic and regulatory functions of peroxisomes. Reumann S, et al. Plant Physiol, 2009 May. PMID 19329564, Free PMC Article
  3. Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Szponarski W, et al. Proteomics, 2004 Feb. PMID 14760709
  4. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001336118.1
NM_001336119.1
NM_128309.4
NM_179771.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables dephospho-CoA kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within coenzyme A biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in coenzyme A biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in peroxisome HDA PubMed 
located_in peroxisome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in vacuole HDA PubMed 

General protein information

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Preferred Names
dephospho-CoA kinase family
NP_180318.1
  • ATCOAE; FUNCTIONS IN: ATP binding, dephospho-CoA kinase activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: peroxisome, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dephospho-CoA kinase (InterPro:IPR001977); Has 7074 Blast hits to 7073 proteins in 2608 species: Archae - 1; Bacteria - 4684; Metazoa - 251; Fungi - 135; Plants - 58; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink).
NP_850102.1
  • ATCOAE; FUNCTIONS IN: ATP binding, dephospho-CoA kinase activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: peroxisome, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dephospho-CoA kinase (InterPro:IPR001977); Has 7074 Blast hits to 7073 proteins in 2608 species: Archae - 1; Bacteria - 4684; Metazoa - 251; Fungi - 135; Plants - 58; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11748015..11750488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128309.4 → NP_180318.1  dephospho-CoA kinase family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180318.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZQH0
    UniProtKB/TrEMBL
    A0A178VZ14, A0A5S9X1X3, A0A654F7D5
    Conserved Domains (1) summary
    PLN02422
    Location:1 → 232
    PLN02422; dephospho-CoA kinase

  2. NM_179771.3 → NP_850102.1  dephospho-CoA kinase family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850102.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZQH0
    UniProtKB/TrEMBL
    A0A178VZ14, A0A5S9X1X3, A0A654F7D5
    Conserved Domains (1) summary
    PLN02422
    Location:1 → 232
    PLN02422; dephospho-CoA kinase

  3. NM_001336118.1 → NP_001324075.1  dephospho-CoA kinase family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZQH0
    UniProtKB/TrEMBL
    A0A178VZ14, A0A5S9X1X3, A0A654F7D5
    Conserved Domains (1) summary
    PLN02422
    Location:1 → 232
    PLN02422; dephospho-CoA kinase

  4. NM_001336119.1 → NP_001324076.1  dephospho-CoA kinase family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZQH0
    UniProtKB/TrEMBL
    A0A178VZ14, A0A5S9X1X3, A0A654F7D5
    Conserved Domains (1) summary
    PLN02422
    Location:1 → 232
    PLN02422; dephospho-CoA kinase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZQH0.1

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