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AT2G26210 Ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817161, updated on 15-Feb-2024

Summary

Gene symbol
AT2G26210
Gene description
Ankyrin repeat family protein
Primary source
Araport:AT2G26210
Locus tag
AT2G26210
See related
TAIR:AT2G26210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T1D16.15; T1D16_15
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Genomic context

See AT2G26210 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (11157118..11159417)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene calmodulin-binding family protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene ncRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001084492.2
NM_001336043.1
NM_001336044.1
NM_001336045.1
NM_001336046.1
NM_001336047.1
NM_179745.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
 
located_in peroxisome HDA PubMed 

General protein information

Preferred Names
Ankyrin repeat family protein
NP_001077961.1
  • Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); Has 8306 Blast hits to 5752 proteins in 510 species: Archae - 43; Bacteria - 849; Metazoa - 2690; Fungi - 383; Plants - 471; Viruses - 37; Other Eukaryotes - 3833 (source: NCBI BLink).
NP_001318289.1
  • Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110).
NP_850076.1
  • Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); Has 8313 Blast hits to 5755 proteins in 512 species: Archae - 43; Bacteria - 849; Metazoa - 2693; Fungi - 398; Plants - 471; Viruses - 37; Other Eukaryotes - 3822 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11157118..11159417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_179745.3NP_850076.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850076.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSW6, A0A5S9X1B9, Q8VZ34
    Conserved Domains (3) summary
    cd00204
    Location:106175
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13857
    Location:121175
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:106132
    ANK; ANK repeat [structural motif]
  2. NM_001084492.2NP_001077961.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077961.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VUI5, A8MR72
    Conserved Domains (3) summary
    cd00204
    Location:83152
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13857
    Location:98152
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:83109
    ANK; ANK repeat [structural motif]
  3. NM_001336044.1NP_001323604.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSW6, A0A5S9X1B9, Q8VZ34
  4. NM_001336046.1NP_001323602.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSW6, A0A5S9X1B9, Q8VZ34
  5. NM_001336045.1NP_001323605.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSW6, A0A5S9X1B9, Q8VZ34
  6. NM_001336047.1NP_001323603.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSW6, A0A5S9X1B9, Q8VZ34
  7. NM_001336043.1NP_001318289.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VUI5, A8MR72
    Conserved Domains (3) summary
    cd00204
    Location:83152
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13857
    Location:98152
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:83109
    ANK; ANK repeat [structural motif]