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PUP5 purine permease 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816956, updated on 18-Sep-2024

Summary

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Official Symbol
PUP5
Official Full Name
purine permease 5
Primary source
TAIR:AT2G24220
Locus tag
AT2G24220
See related
Araport:AT2G24220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATPUP5; F27D4.13; F27D4_13; purine permease 5
Summary
Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.
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Genomic context

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See PUP5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (10300032..10301787)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene terpene synthase 10 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new family of high-affinity transporters for adenine, cytosine, and purine derivatives in Arabidopsis. Gillissen B, et al. Plant Cell, 2000 Feb. PMID 10662864, Free PMC Article
  2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001335925.1
NM_127983.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables purine nucleobase transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables purine nucleobase transmembrane transporter activity TAS
Traceable Author Statement
more info
 PubMed 
enables purine nucleoside transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within purine nucleobase transport TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane TAS
Traceable Author Statement
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
purine permease 5
NP_001318280.1
  • purine permease 5 (PUP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1).
NP_179999.2
  • purine permease 5 (PUP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1); Has 506 Blast hits to 495 proteins in 68 species: Archae - 4; Bacteria - 41; Metazoa - 16; Fungi - 40; Plants - 347; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10300032..10301787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001335925.1 → NP_001318280.1  purine permease 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A2H1ZE27, A0A654F0P9
    Conserved Domains (1) summary
    pfam16913
    Location:56 → 359
    PUNUT; Purine nucleobase transmembrane transport

  2. NM_127983.3 → NP_179999.2  purine permease 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179999.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZUH3
    UniProtKB/TrEMBL
    A0A178VV71
    Conserved Domains (1) summary
    pfam16913
    Location:38 → 341
    PUNUT; Purine nucleobase transmembrane transport
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZUH3.2

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