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Microsomal signal peptidase 12 kDa subunit (SPC12) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816774, updated on 18-Sep-2024

Summary

Official Full Name
Microsomal signal peptidase 12 kDa subunit (SPC12)
Primary source
TAIR:AT2G22425
Locus tag
AT2G22425
See related
Araport:AT2G22425
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (9514695..9515674)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SLOW GROWTH 1 Neighboring gene Peroxidase superfamily protein Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene homeobox protein 6

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001084473.2
NM_127807.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in signal peptide processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of signal peptidase complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Microsomal signal peptidase 12 kDa subunit (SPC12)
NP_001077942.1
  • Microsomal signal peptidase 12 kDa subunit (SPC12); FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endomembrane system, integral to membrane, signal peptidase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microsomal signal peptidase 12kDa subunit (InterPro:IPR009542); BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR:AT4G40042.1); Has 315 Blast hits to 315 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 81; Plants - 67; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
NP_565535.1
  • Microsomal signal peptidase 12 kDa subunit (SPC12); FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endomembrane system, signal peptidase complex, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microsomal signal peptidase 12kDa subunit (InterPro:IPR009542); BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR:AT4G40042.1); Has 315 Blast hits to 315 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 81; Plants - 67; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    9514695..9515674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127807.4NP_565535.1  Microsomal signal peptidase 12 kDa subunit (SPC12) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565535.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q7G9Y5, Q944J0
    UniProtKB/TrEMBL
    A0A178VPE5, A0A5S9X0E2
    Conserved Domains (1) summary
    pfam06645
    Location:171
    SPC12; Microsomal signal peptidase 12 kDa subunit (SPC12)
  2. NM_001084473.2NP_001077942.1  Microsomal signal peptidase 12 kDa subunit (SPC12) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077942.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q7G9Y5, Q944J0
    UniProtKB/TrEMBL
    A0A178VPE5, A0A5S9X0E2
    Conserved Domains (1) summary
    pfam06645
    Location:171
    SPC12; Microsomal signal peptidase 12 kDa subunit (SPC12)