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AT2G17020 F-box/RNI-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816205, updated on 7-Sep-2023

Summary

Gene symbol
AT2G17020
Gene description
F-box/RNI-like superfamily protein
Primary source
Araport:AT2G17020
Locus tag
AT2G17020
See related
TAIR:AT2G17020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F6P23.18; F6P23_18
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Genomic context

See AT2G17020 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Sequence:
Chromosome: 2; NC_003071.7 (7396281..7398885, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Mechanosensitive ion channel family protein Neighboring gene Mechanosensitive ion channel family protein Neighboring gene F-box SKIP23-like protein (DUF295) Neighboring gene pentatricopeptide (PPR) repeat-containing protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001335529.1
NM_001335530.1
NM_127255.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
F-box/RNI-like superfamily protein
NP_565400.1
  • F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT1G55590.1); Has 4669 Blast hits to 2409 proteins in 221 species: Archae - 0; Bacteria - 377; Metazoa - 1922; Fungi - 539; Plants - 1335; Viruses - 3; Other Eukaryotes - 493 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    7396281..7398885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127255.4NP_565400.1  F-box/RNI-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565400.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LF00, Q9SDA8
    UniProtKB/TrEMBL
    A0A178VSD3, A0A5S9WYU4
    Conserved Domains (3) summary
    cd09293
    Location:337497
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:328353
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam00646
    Location:2260
    F-box; F-box domain
  2. NM_001335529.1NP_001325033.1  F-box/RNI-like superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B1X8
  3. NM_001335530.1NP_001325032.1  F-box/RNI-like superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSD3, A0A1P8B1Z8, A0A5S9WYU4