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PDRG1 p53 and DNA damage regulated 1 [ Homo sapiens (human) ]

Gene ID: 81572, updated on 1-Aug-2020

Summary

Official Symbol
PDRG1provided by HGNC
Official Full Name
p53 and DNA damage regulated 1provided by HGNC
Primary source
HGNC:HGNC:16119
See related
Ensembl:ENSG00000088356 MIM:610789
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PDRG; C20orf126
Expression
Broad expression in testis (RPKM 24.8), placenta (RPKM 9.3) and 25 other tissues See more
Orthologs

Genomic context

See PDRG1 in Genome Data Viewer
Location:
20q11.21
Exon count:
5
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (31944337..31952046, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (30532758..30556513, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene tubulin tyrosine ligase like 9 Neighboring gene RNA, U1 small nuclear 94, pseudogene Neighboring gene Sharpr-MPRA regulatory region 918 Neighboring gene XK related 7 Neighboring gene RNA, 5S ribosomal pseudogene 481

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
protein folding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
prefoldin complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
p53 and DNA damage-regulated protein 1
Names
epididymis secretory sperm binding protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_030815.3NP_110442.1  p53 and DNA damage-regulated protein 1

    See identical proteins and their annotated locations for NP_110442.1

    Status: VALIDATED

    Source sequence(s)
    AL031658, AY286301, BC009334, BM679702
    Consensus CDS
    CCDS13194.1
    UniProtKB/Swiss-Prot
    Q9NUG6
    Related
    ENSP00000202017.4, ENST00000202017.6
    Conserved Domains (1) summary
    cl09111
    Location:27108
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20200522

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    31944337..31952046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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