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C1orf21 chromosome 1 open reading frame 21 [ Homo sapiens (human) ]

Gene ID: 81563, updated on 4-Jul-2021

Summary

Official Symbol
C1orf21provided by HGNC
Official Full Name
chromosome 1 open reading frame 21provided by HGNC
Primary source
HGNC:HGNC:15494
See related
Ensembl:ENSG00000116667
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PIG13
Expression
Ubiquitous expression in skin (RPKM 14.5), brain (RPKM 10.8) and 23 other tissues See more
Orthologs
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Genomic context

See C1orf21 in Genome Data Viewer
Location:
1q25.3
Exon count:
6
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (184387029..184629019)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (184356163..184598153)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724830 Neighboring gene RNA, 7SL, cytoplasmic 654, pseudogene Neighboring gene uncharacterized LOC102724857 Neighboring gene tRNA methyltransferase 2 homolog B (S. cerevisiae) pseudogene Neighboring gene uncharacterized LOC107985236 Neighboring gene uncharacterized LOC105371648 Neighboring gene ER degradation enhancing alpha-mannosidase like protein 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
uncharacterized protein C1orf21
Names
cell proliferation-inducing gene 13 protein
proliferation-inducing protein 13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_030806.4NP_110433.1  uncharacterized protein C1orf21

    See identical proteins and their annotated locations for NP_110433.1

    Status: VALIDATED

    Source sequence(s)
    AF312864, AK056487, AL358152, AY258286, BM793961
    Consensus CDS
    CCDS1362.1
    UniProtKB/Swiss-Prot
    Q9H246
    UniProtKB/TrEMBL
    A0A024R926
    Related
    ENSP00000235307.6, ENST00000235307.7
    Conserved Domains (1) summary
    pfam15389
    Location:2118
    DUF4612; Domain of unknown function (DUF4612)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    184387029..184629019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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