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AT2G02410 yacP-like NYN domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814772, updated on 27-Sep-2019

Summary

Gene symbol
AT2G02410
Gene description
yacP-like NYN domain protein
Primary source
Araport:AT2G02410
Locus tag
AT2G02410
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AT2G02420; T16F16.20; T16F16_20

Genomic context

See AT2G02410 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Sequence:
Chromosome: 2; NC_003071.7 (632634..634994)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase (class zeta) 2 Neighboring gene glutathione S-transferase zeta 1 Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene miscRNA Neighboring gene transmembrane protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001202571.2
NM_001335111.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
chloroplast ISM
Inferred from Sequence Model
more info
 
nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
yacP-like NYN domain protein
NP_001189500.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298).
NP_001189501.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298).
NP_178346.2
  • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298); Has 1151 Blast hits to 1151 proteins in 597 species: Archae - 0; Bacteria - 1105; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    632634..634994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001335113.1NP_001324005.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AYS9
  2. NM_001335112.1NP_001324004.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AYV9
  3. NM_001335114.1NP_001324002.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AYT1
  4. NM_001202572.1NP_001189501.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189501.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IQD5
    Conserved Domains (1) summary
    pfam05991
    Location:68234
    NYN_YacP; YacP-like NYN domain
  5. NM_001335115.1NP_001324003.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AYR9
  6. NM_001335116.1NP_001324000.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AYV8
  7. NM_001335117.1NP_001324001.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AYQ2
  8. NM_001335108.1NP_001323996.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AYR9
  9. NM_001335109.1NP_001323997.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AYV8
  10. NM_126298.4NP_178346.2  yacP-like NYN domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178346.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8GZ36
    Conserved Domains (1) summary
    pfam05991
    Location:133299
    NYN_YacP; YacP-like NYN domain
  11. NM_001335110.1NP_001323998.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AYP8
  12. NM_001202571.2NP_001189500.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189500.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IQD4
    Conserved Domains (1) summary
    pfam05991
    Location:85251
    NYN_YacP; YacP-like NYN domain
  13. NM_001335111.1NP_001323999.1  yacP-like NYN domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AYS9
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