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PTR4 Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814733, updated on 6-May-2021

Summary

Gene symbol
PTR4
Gene description
Major facilitator superfamily protein
Primary source
Araport:AT2G02020
Locus tag
AT2G02020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtNPF8.4; AtPTR4; F14H20.9; F14H20_9; NPF8.4; NRT1/ PTR family 8.4; peptide transporter 4
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Genomic context

See PTR4 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (478977..481185)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene glutamate decarboxylase 3 Neighboring gene glutamate decarboxylase 4 Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

NM_001202569.1
NM_126263.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in oligopeptide transport IEA
Inferred from Electronic Annotation
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
 
is_active_in plant-type vacuole membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in plant-type vacuole membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Major facilitator superfamily protein
NP_001189498.1
  • Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1).
NP_178311.1
  • Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 2 (TAIR:AT2G02040.1); Has 8051 Blast hits to 7680 proteins in 1472 species: Archae - 0; Bacteria - 4049; Metazoa - 790; Fungi - 469; Plants - 2161; Viruses - 0; Other Eukaryotes - 582 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    478977..481185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126263.3NP_178311.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178311.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84WG0
    Conserved Domains (1) summary
    pfam00854
    Location:114497
    PTR2; POT family
  2. NM_001202569.1NP_001189498.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189498.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IPF3
    Conserved Domains (1) summary
    pfam00854
    Location:114476
    PTR2; POT family
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