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PF3D7_1410400 rhoptry-associated protein 1 [ Plasmodium falciparum 3D7 ]

Gene ID: 811683, updated on 12-Sep-2024
Gene symbol
PF3D7_1410400
Gene description
rhoptry-associated protein 1
Locus tag
PF3D7_1410400
See related
PlasmoDB:PF3D7_1410400; VEuPathDB:PF3D7_1410400
Gene type
protein coding
RNA name
rhoptry-associated protein 1
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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See PF3D7_1410400 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
1
Sequence:
Chromosome: 14; NC_037283.1 (420442..422790)

Chromosome 14 - NC_037283.1Genomic Context describing neighboring genes Neighboring gene CTP synthase Neighboring gene WD repeat-containing protein, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene eukaryotic translation initiation factor 2 subunit gamma, putative

Genomic Sequence:
NC_037283.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The Plasmodium rhoptry associated protein complex is important for parasitophorous vacuole membrane structure and intraerythrocytic parasite growth. Ghosh S, et al. Cell Microbiol, 2017 Aug. PMID 28205319
  2. Characterisation and sequence of a protective rhoptry antigen from Plasmodium falciparum. Ridley RG, et al. Mol Biochem Parasitol, 1990 Jun. PMID 2200961
  3. A role for adaptor protein complex 1 in protein targeting to rhoptry organelles in Plasmodium falciparum. Kaderi Kibria KM, et al. Biochim Biophys Acta, 2015 Mar. PMID 25573429
  4. Identification of rhoptry trafficking determinants and evidence for a novel sorting mechanism in the malaria parasite Plasmodium falciparum. Richard D, et al. PLoS Pathog, 2009 Mar. PMID 19266084, Free PMC Article
  5. Food vacuole proteome of the malarial parasite Plasmodium falciparum. Lamarque M, et al. Proteomics Clin Appl, 2008 Sep. PMID 21136929

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables RNA binding HDA PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular vesicle HDA PubMed 
located_in food vacuole HDA PubMed 
located_in nucleus HDA PubMed 
located_in rhoptry IDA
Inferred from Direct Assay
more info
 PubMed 
located_in symbiont-containing vacuole IDA
Inferred from Direct Assay
more info
 PubMed 
Preferred Names
rhoptry-associated protein 1

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037283.1 Reference assembly

    Range
    420442..422790
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001348239.1 → XP_001348275.1  rhoptry-associated protein 1 [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001348275.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q8ILZ1, Q9U431, W7JYQ4
    Conserved Domains (1) summary
    pfam07218
    Location:1 → 782
    RAP1; Rhoptry-associated protein 1 (RAP-1)
Nucleotide Protein
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