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PF3D7_1409800 CUGBP Elav-like family member 2, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 811677, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_1409800
Gene description
CUGBP Elav-like family member 2, putative
Locus tag
PF3D7_1409800
See related
PlasmoDB:PF3D7_1409800; VEuPathDB:PF3D7_1409800
Gene type
protein coding
RNA name
CUGBP Elav-like family member 2, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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See PF3D7_1409800 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
1
Sequence:
Chromosome: 14; NC_037283.1 (383188..384732)

Chromosome 14 - NC_037283.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved protein, unknown function Neighboring gene cytidine diphosphate-diacylglycerol synthase Neighboring gene ER membrane protein complex subunit 2, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037283.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Universal features of post-transcriptional gene regulation are critical for Plasmodium zygote development. Mair GR, et al. PLoS Pathog, 2010 Feb 12. PMID 20169188, Free PMC Article
  2. The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum. Bunnik EM, et al. Genome Biol, 2016 Jul 5. PMID 27381095, Free PMC Article
  3. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
  4. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
  5. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables mRNA binding HDA PubMed 
Component Evidence Code Pubs
located_in P granule ISO
Inferred from Sequence Orthology
more info
 PubMed 
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
CUGBP Elav-like family member 2, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037283.1 Reference assembly

    Range
    383188..384732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001348233.1 → XP_001348269.1  CUGBP Elav-like family member 2, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001348269.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V1U3, A0A024VM02, A0A024W100, A0A024WJ15, A0A024X0L0, A0A0L1ID68, A0A0L7KEL1, Q8ILZ7, W4I974, W4IWH4, W7F8G7, W7FNY6, W7JH44, W7JZP6
    Conserved Domains (3) summary
    pfam00397
    Location:356 → 383
    WW; WW domain
    cd12362
    Location:407 → 469
    RRM3_CELF1-6; RNA recognition motif 3 (RRM3) found in CELF/Bruno-like family of RNA binding proteins CELF1, CELF2, CELF3, CELF4, CELF5, CELF6 and similar proteins
    cl17169
    Location:153 → 231
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
Heading Accession and Version

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