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PF3D7_1400600 rifin [ Plasmodium falciparum 3D7 ]

Gene ID: 811606, updated on 14-Nov-2024
Gene symbol
PF3D7_1400600
Gene description
rifin
Locus tag
PF3D7_1400600
See related
PlasmoDB:PF3D7_1400600; VEuPathDB:PF3D7_1400600
Gene type
protein coding
RNA name
rifin
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Try the new Transcripts and proteins table
See PF3D7_1400600 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
2
Sequence:
Chromosome: 14; NC_037283.1 (20897..22232, complement)

Chromosome 14 - NC_037283.1Genomic Context describing neighboring genes Neighboring gene rifin Neighboring gene rifin Neighboring gene stevor Neighboring gene rifin

Genomic Sequence:
NC_037283.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. RIFINs are adhesins implicated in severe Plasmodium falciparum malaria. Goel S, et al. Nat Med, 2015 Apr. PMID 25751816
  2. Rifins: a second family of clonally variant proteins expressed on the surface of red cells infected with Plasmodium falciparum. Kyes SA, et al. Proc Natl Acad Sci U S A, 1999 Aug 3. PMID 10430943, Free PMC Article
  3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by GeneDB

Process Evidence Code Pubs
acts_upstream_of_or_within adhesion of symbiont to microvasculature IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within antigenic variation TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within symbiont-mediated perturbation of host erythrocyte aggregation IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in Maurer's cleft IDA
Inferred from Direct Assay
more info
 PubMed 
located_in host cell plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in symbiont-containing vacuole IDA
Inferred from Direct Assay
more info
 PubMed 
Preferred Names
rifin

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037283.1 Reference assembly

    Range
    20897..22232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001348145.1 → XP_001348181.1  rifin [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001348181.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2I0C2G5, Q8IM82
    Conserved Domains (1) summary
    PTZ00046
    Location:1 → 367
    PTZ00046; rifin; Provisional
Nucleotide Protein
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