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PF3D7_1224300 polyadenylate-binding protein 1, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 811286, updated on 16-Oct-2023

Summary

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Gene symbol
PF3D7_1224300
Gene description
polyadenylate-binding protein 1, putative
Locus tag
PF3D7_1224300
Gene type
protein coding
RNA name
polyadenylate-binding protein 1, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_037284.1 (988628..991255)

Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene conserved protein, unknown function Neighboring gene BRO1 domain-containing protein, putative Neighboring gene WD repeat-containing protein, putative Neighboring gene histone chaperone ASF1, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037284.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nuclear, Cytosolic, and Surface-Localized Poly(A)-Binding Proteins of Plasmodium yoelii. Minns AM, et al. mSphere, 2018 Jan-Feb. PMID 29359180, Free PMC Article
  2. Isolation and functional characterization of eIF4F components and poly(A)-binding protein from Plasmodium falciparum. Tuteja R, et al. Parasitol Int, 2009 Dec. PMID 19751846
  3. Universal features of post-transcriptional gene regulation are critical for Plasmodium zygote development. Mair GR, et al. PLoS Pathog, 2010 Feb 12. PMID 20169188, Free PMC Article
  4. Interrogating the Plasmodium Sporozoite Surface: Identification of Surface-Exposed Proteins and Demonstration of Glycosylation on CSP and TRAP by Mass Spectrometry-Based Proteomics. Swearingen KE, et al. PLoS Pathog, 2016 Apr. PMID 27128092, Free PMC Article
  5. Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH.2 in the Human Malaria Parasite. Sinha A, et al. mBio, 2021 Apr 27. PMID 33906926, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Our studies indicate that PfPABP binds poly(A) specifically.
    Title: Isolation and functional characterization of eIF4F components and poly(A)-binding protein from Plasmodium falciparum.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables RNA binding HDA PubMed 
enables poly(A) binding ISO
Inferred from Sequence Orthology
more info
 PubMed 
Component Evidence Code Pubs
located_in P granule ISO
Inferred from Sequence Orthology
more info
 PubMed 
located_in cell surface IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 PubMed 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 PubMed 
located_in nuclear periphery ISO
Inferred from Sequence Orthology
more info
 PubMed 
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
polyadenylate-binding protein 1, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037284.1 Reference assembly

    Range
    988628..991255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001350604.1 → XP_001350640.1  polyadenylate-binding protein 1, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001350640.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V3P9, A0A024VP24, A0A024WM76, A0A024X658, A0A0L1IDR6, A0A0L7KDK3, A1EAA0, Q8I5H4, W4J0Y6, W7EXC4, W7FEX5, W7K3I7
    Conserved Domains (1) summary
    TIGR01628
    Location:16 → 872
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
Nucleotide Protein
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