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LOC8085636 cytochrome P450 90A4 [ Sorghum bicolor (sorghum) ]

Gene ID: 8085636, updated on 22-Oct-2023
Gene symbol
LOC8085636
Gene description
cytochrome P450 90A4
Locus tag
SORBI_3005G030400
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 5 NC_012874.2 (2705725..2709267, complement)

Chromosome 5 - NC_012874.2Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase CIP8 Neighboring gene protein FLX-like 3 Neighboring gene two-component response regulator ORR9-like Neighboring gene DNA-directed RNA polymerase V subunit 5A

Genomic Sequence:
NC_012874.2 Chromosome 5 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brassinosteroid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in brassinosteroid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cytochrome P450 90A4

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012874.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    2705725..2709267 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002450204.2 → XP_002450249.2  cytochrome P450 90A4

    UniProtKB/TrEMBL
    A0A1Z5RHE5, A0A921QUJ8
    Conserved Domains (1) summary
    cl12078
    Location:50 → 510
    p450; Cytochrome P450
Nucleotide Protein
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