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LOC8073145 pentatricopeptide repeat-containing protein At1g01970 [ Sorghum bicolor (sorghum) ]

Gene ID: 8073145, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8073145
Gene description
pentatricopeptide repeat-containing protein At1g01970
Locus tag
SORBI_3002G406400
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 2 NC_012871.2 (75592932..75594803, complement)

Chromosome 2 - NC_012871.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8072267 Neighboring gene nucleolar protein 56 Neighboring gene elongation factor 1-beta Neighboring gene pre-rRNA-processing protein ESF2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012871.2 Chromosome 2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pentatricopeptide repeat-containing protein At1g01970

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012871.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    75592932..75594803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002463296.2 → XP_002463341.1  pentatricopeptide repeat-containing protein At1g01970

    See identical proteins and their annotated locations for XP_002463341.1

    UniProtKB/TrEMBL
    A0A921RU80, A0A921RVF4, C5X4T3
    Conserved Domains (2) summary
    PLN03218
    Location:128 → 365
    PLN03218; maturation of RBCL 1; Provisional
    sd00004
    Location:155 → 181
    PPR; PPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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