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LOC8054927 putative pectinesterase 11 [ Sorghum bicolor (sorghum) ]

Gene ID: 8054927, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8054927
Gene description
putative pectinesterase 11
Locus tag
SORBI_3003G231500
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 3 NC_012872.2 (57084718..57086526, complement)

Chromosome 3 - NC_012872.2Genomic Context describing neighboring genes Neighboring gene laccase-2 Neighboring gene uncharacterized LOC110433520 Neighboring gene CBS domain-containing protein CBSX3, mitochondrial Neighboring gene protein RADIALIS-like 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012872.2 Chromosome 3 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative pectinesterase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012872.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    57084718..57086526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021456277.1 → XP_021311952.1  putative pectinesterase 11

    UniProtKB/TrEMBL
    A0A1B6Q4W0, A0A921UR10
    Conserved Domains (1) summary
    cl27601
    Location:1 → 299
    Pectinesterase; Pectinesterase
Nucleotide Protein
Heading Accession and Version

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