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LOC8042980 protein O-GlcNAcase [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8042980, updated on 26-Mar-2024

Summary

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Gene symbol
LOC8042980
Gene description
protein O-GlcNAcase
See related
VectorBase:ISCP_038282; EnsemblRapid:LOC8042980
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609884.1 (74876655..74901390)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024387897.1 (224377..249123, complement)

NW_024609884.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase 10-A Neighboring gene aspartate aminotransferase, cytoplasmic Neighboring gene putative GTP-binding protein 6 Neighboring gene eukaryotic translation initiation factor 2-alpha kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylglucosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoprotein metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-GlcNAcase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609884.1 Reference ASM1692078v2

    Range
    74876655..74901390
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029994357.4 → XP_029850217.3  protein O-GlcNAcase isoform X1

    UniProtKB/TrEMBL
    A0A4D5S1T0, B7QLA9
    Related
    XP_029850217.3, XM_029994357.4
    Conserved Domains (1) summary
    pfam07555
    Location:23 → 292
    NAGidase; beta-N-acetylglucosaminidase

  2. XM_029994358.4 → XP_029850218.3  protein O-GlcNAcase isoform X2

    UniProtKB/TrEMBL
    B7QLA9
    Related
    XP_029850218.3, XM_029994358.4
Nucleotide Protein
Heading Accession and Version

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