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or102-2 odorant receptor, family C, subfamily 102, member 2 [ Danio rerio (zebrafish) ]

Gene ID: 80357, updated on 17-Nov-2020

Summary

Official Symbol
or102-2provided by ZNC
Official Full Name
odorant receptor, family C, subfamily 102, member 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-010308-4
See related
Ensembl:ENSDARG00000004598
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
or5; or5.3; Dr3OR15; olfr5.3
Orthologs

Genomic context

See or102-2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (31466739..31468055)
105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (31585998..31587314)
103 previous assembly Zv9 (GCF_000002035.4) 15 NC_007126.5 (30764546..30765529)

Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101883115 Neighboring gene odorant receptor, family C, subfamily 102, member 1 Neighboring gene odorant receptor, family C, subfamily 102, member 3 Neighboring gene odorant receptor, family C, subfamily 102, member 4

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
odorant binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
detection of chemical stimulus involved in sensory perception of smell IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
response to stimulus IEA
Inferred from Electronic Annotation
more info
 
sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 
signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
odorant receptor 102-2; odorant receptor, family C, subfamily 102, member 2
Names
Dr3OR15.49
odorant receptor, family 5, member 3
olfactory receptor protein 5.3

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_131739.1NP_571814.1  odorant receptor 102-2

    See identical proteins and their annotated locations for NP_571814.1

    Status: PROVISIONAL

    Source sequence(s)
    AF112374
    UniProtKB/TrEMBL
    Q9I8Z6
    Related
    ENSDARP00000005012.2, ENSDART00000017810.4
    Conserved Domains (2) summary
    pfam00001
    Location:49300
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:42315
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007126.7 Reference GRCz11 Primary Assembly

    Range
    31466739..31468055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009291681.1XP_009289956.1  odorant receptor, family C, subfamily 102, member 2 isoform X1

    See identical proteins and their annotated locations for XP_009289956.1

    UniProtKB/TrEMBL
    Q2PRB6
    Conserved Domains (1) summary
    cl21561
    Location:42315
    7tm_4; Olfactory receptor
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