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PKD1L1-AS1 PKD1L1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 80099, updated on 13-May-2022

Summary

Official Symbol
PKD1L1-AS1provided by HGNC
Official Full Name
PKD1L1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:21911
See related
Ensembl:ENSG00000136275 AllianceGenome:HGNC:21911
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C7orf69
Summary
Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See PKD1L1-AS1 in Genome Data Viewer
Location:
7p12.3
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (47795291..47819847)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (47957796..47982339)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (47834889..47859445)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 6862 Neighboring gene Sharpr-MPRA regulatory region 14324 Neighboring gene polycystin 1 like 1, transient receptor potential channel interacting Neighboring gene Sharpr-MPRA regulatory region 8949 Neighboring gene Sharpr-MPRA regulatory region 5513 Neighboring gene HUS1 checkpoint clamp component

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Other Names

  • uncharacterized protein C7orf69

Clone Names

  • FLJ21075

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_161268.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC019066, AC069282
    Related
    ENST00000623971.3
  2. NR_161269.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC019066, AC069282
    Related
    ENST00000418326.3

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    47795291..47819847
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    47957796..47982339
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001302627.1: Suppressed sequence

    Description
    NM_001302627.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  2. NM_025031.2: Suppressed sequence

    Description
    NM_025031.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.