Format

Send to:

Choose Destination

CCDC15 coiled-coil domain containing 15 [ Homo sapiens (human) ]

Gene ID: 80071, updated on 23-Nov-2021

Summary

Official Symbol
CCDC15provided by HGNC
Official Full Name
coiled-coil domain containing 15provided by HGNC
Primary source
HGNC:HGNC:25798
See related
Ensembl:ENSG00000149548
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 5.0), skin (RPKM 0.7) and 17 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See CCDC15 in Genome Data Viewer
Location:
11q24.2
Exon count:
18
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (124954121..125041489)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (124824098..124911385)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984406 Neighboring gene hepatic and glial cell adhesion molecule Neighboring gene hepatocellular carcinoma, down-regulated 1 Neighboring gene CCDC15 divergent transcript Neighboring gene solute carrier family 37 member 2 Neighboring gene transmembrane protein 218

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Associated conditions

Description Tests
Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
GeneReviews: Not available

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ13215

Gene Ontology Provided by GOA

Component Evidence Code Pubs
is_active_in centrosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in centrosome IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
coiled-coil domain-containing protein 15

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_052613.1 RefSeqGene

    Range
    5082..92369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_025004.3NP_079280.2  coiled-coil domain-containing protein 15

    See identical proteins and their annotated locations for NP_079280.2

    Status: VALIDATED

    Source sequence(s)
    AK023277, AP003501, AW339835, BC018540, BU569785, DB516555
    Consensus CDS
    CCDS44756.1
    UniProtKB/Swiss-Prot
    Q0P6D6
    Related
    ENSP00000341684.5, ENST00000344762.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    124954121..125041489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017018346.1XP_016873835.1  coiled-coil domain-containing protein 15 isoform X1

  2. XM_017018348.1XP_016873837.1  coiled-coil domain-containing protein 15 isoform X3

  3. XM_017018350.1XP_016873839.1  coiled-coil domain-containing protein 15 isoform X5

  4. XM_017018351.1XP_016873840.1  coiled-coil domain-containing protein 15 isoform X6

  5. XM_017018353.1XP_016873842.1  coiled-coil domain-containing protein 15 isoform X8

  6. XM_017018347.1XP_016873836.1  coiled-coil domain-containing protein 15 isoform X2

  7. XM_017018352.1XP_016873841.1  coiled-coil domain-containing protein 15 isoform X7

  8. XM_017018349.1XP_016873838.1  coiled-coil domain-containing protein 15 isoform X4

Support Center