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PSME3IP1 proteasome activator subunit 3 interacting protein 1 [ Homo sapiens (human) ]

Gene ID: 80011, updated on 10-Oct-2020

Summary

Official Symbol
PSME3IP1provided by HGNC
Official Full Name
proteasome activator subunit 3 interacting protein 1provided by HGNC
Primary source
HGNC:HGNC:29856
See related
Ensembl:ENSG00000172775 MIM:617766
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CDA10; NIP30; PIP30; CDA018; FAM192A; C16orf94
Expression
Ubiquitous expression in brain (RPKM 12.2), testis (RPKM 10.1) and 25 other tissues See more
Orthologs

Genomic context

See PSME3IP1 in Genome Data Viewer
Location:
16q13
Exon count:
15
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (57152466..57186116, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (57186378..57220387, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene copine 2 Neighboring gene uncharacterized LOC105371289 Neighboring gene Sharpr-MPRA regulatory region 3054 Neighboring gene ring finger and SPRY domain containing 1 Neighboring gene ADP ribosylation factor like GTPase 2 binding protein

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ21799, MGC74898

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
negative regulation of proteasomal protein catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of protein binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
PSME3-interacting protein
Names
NEFA-interacting nuclear protein NIP30
PA28G interacting protein 30kDa
PA28G-interacting protein
PSME3 interacting protein 30kDa
family with sequence similarity 192 member A
protein FAM192A

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001354078.1NP_001341007.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  2. NM_001354079.1NP_001341008.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  3. NM_001354080.1NP_001341009.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Related
    ENSP00000457740.1, ENST00000569266.5
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  4. NM_001354081.2NP_001341010.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  5. NM_001354082.1NP_001341011.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  6. NM_001354083.2NP_001341012.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Related
    ENSP00000457850.1, ENST00000567439.5
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  7. NM_001354084.2NP_001341013.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  8. NM_001354085.2NP_001341014.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  9. NM_001354086.2NP_001341015.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  10. NM_001354087.1NP_001341016.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  11. NM_001354088.2NP_001341017.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  12. NM_001354089.2NP_001341018.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  13. NM_001354090.2NP_001341019.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  14. NM_001354091.2NP_001341020.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  15. NM_001354092.2NP_001341021.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  16. NM_001354094.2NP_001341023.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  17. NM_001354095.2NP_001341024.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  18. NM_001354096.2NP_001341025.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  19. NM_001354097.2NP_001341026.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  20. NM_001354098.2NP_001341027.1  PSME3-interacting protein isoform b

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Conserved Domains (1) summary
    pfam10187
    Location:41129
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  21. NM_001354099.2NP_001341028.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  22. NM_001354100.2NP_001341029.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  23. NM_001354101.2NP_001341030.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  24. NM_001354102.2NP_001341031.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  25. NM_001354103.2NP_001341032.1  PSME3-interacting protein isoform a

    Status: VALIDATED

    Source sequence(s)
    AC009090
    Consensus CDS
    CCDS42168.1
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  26. NM_024946.4NP_079222.1  PSME3-interacting protein isoform a

    See identical proteins and their annotated locations for NP_079222.1

    Status: VALIDATED

    Source sequence(s)
    AC009090, BC020536, CA308353, DB101263
    Consensus CDS
    CCDS42168.1
    UniProtKB/Swiss-Prot
    Q9GZU8
    UniProtKB/TrEMBL
    A0A024R6T8
    Related
    ENSP00000335808.6, ENST00000309137.13
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    57152466..57186116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024450454.1XP_024306222.1  PSME3-interacting protein isoform X4

    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  2. XM_024450453.1XP_024306221.1  PSME3-interacting protein isoform X4

    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  3. XM_017023695.1XP_016879184.1  PSME3-interacting protein isoform X4

    UniProtKB/Swiss-Prot
    Q9GZU8
    UniProtKB/TrEMBL
    A0A024R6T8
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  4. XM_024450452.1XP_024306220.1  PSME3-interacting protein isoform X4

    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  5. XM_017023704.1XP_016879193.1  PSME3-interacting protein isoform X4

    UniProtKB/Swiss-Prot
    Q9GZU8
    UniProtKB/TrEMBL
    A0A024R6T8
    Related
    ENSP00000374098.5, ENST00000389447.9
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  6. XM_017023696.1XP_016879185.1  PSME3-interacting protein isoform X4

    UniProtKB/Swiss-Prot
    Q9GZU8
    UniProtKB/TrEMBL
    A0A024R6T8
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  7. XM_024450450.1XP_024306218.1  PSME3-interacting protein isoform X2

  8. XM_024450451.1XP_024306219.1  PSME3-interacting protein isoform X4

    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  9. XM_017023681.2XP_016879170.1  PSME3-interacting protein isoform X3

    Conserved Domains (1) summary
    pfam10187
    Location:21109
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
  10. XM_017023703.1XP_016879192.1  PSME3-interacting protein isoform X4

    UniProtKB/Swiss-Prot
    Q9GZU8
    UniProtKB/TrEMBL
    A0A024R6T8
    Conserved Domains (1) summary
    pfam10187
    Location:15103
    Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
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