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HAND2-AS1 HAND2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 79804, updated on 11-Sep-2019

Summary

Official Symbol
HAND2-AS1provided by HGNC
Official Full Name
HAND2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:48872
See related
Ensembl:ENSG00000237125 MIM:617240
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
UPH; DEIN; NBLA00301
Expression
Biased expression in endometrium (RPKM 13.8), adrenal (RPKM 11.4) and 8 other tissues See more
Orthologs

Genomic context

See HAND2-AS1 in Genome Data Viewer
Location:
4q34.1
Exon count:
10
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (173528600..173591255)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (174451583..174463083)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene stimulator of chondrogenesis 1 Neighboring gene uncharacterized LOC112267917 Neighboring gene uncharacterized LOC101928409 Neighboring gene heart and neural crest derivatives expressed 2 Neighboring gene mortality factor 4 (pseudogene) Neighboring gene RAN pseudogene 6

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Homology

Other Names

  • HAND2 antisense RNA 1 (head to head)
  • differentially expressed in neuroblastoma
  • neuroblastoma transcript 301

Clone Names

  • FLJ11539, FLJ41674, FLJ50876

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003679.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1)
    Source sequence(s)
    AA156933, EF529505
    Related
    ENST00000505621.5
  2. NR_136192.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2)
    Source sequence(s)
    AA156933, BQ882603, EU000853
    Related
    ENST00000507062.5
  3. NR_136193.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3)
    Source sequence(s)
    AA156933, AB075501, AC093849, BQ882603, EU000853
  4. NR_136194.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4)
    Source sequence(s)
    AA156933, AK300846, BQ882603, EU000853
  5. NR_136195.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5)
    Source sequence(s)
    AC093849, AC113154, AK054605, BQ882603
    Related
    ENST00000503474.5
  6. NR_136196.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6)
    Source sequence(s)
    AC079789, BQ882603, DA863153, DB292439
  7. NR_136197.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7)
    Source sequence(s)
    AA156933, DC421261, EU000853
  8. NR_136198.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (8)
    Source sequence(s)
    AA156933, BG519698, BQ882603, EU000853
  9. NR_136199.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (9)
    Source sequence(s)
    AA156933, AC093849, BQ882603, DC386781, EU000853
  10. NR_136200.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (10)
    Source sequence(s)
    AA156933, AB075501, AU253586, BQ882603, EU000853
    Related
    ENST00000502896.5
  11. NR_136201.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (11)
    Source sequence(s)
    AA156933, AB075501, AC093849, BQ882603, DA665500, EU000853

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    173528600..173591255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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