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krt8 keratin 8 [ Danio rerio (zebrafish) ]

Gene ID: 797433, updated on 24-Oct-2020

Summary

Official Symbol
krt8provided by ZNC
Official Full Name
keratin 8provided by ZNC
Primary source
ZFIN:ZDB-GENE-030411-5
See related
Ensembl:ENSDARG00000058358
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
DreK; zfk8; DreK8; cb186; krt2-; zf-K8; krt2-8; sb:cb18; sb:cb186; wu:fa20h0; wu:fa95h1; etID43142.; wu:fa20h05; wu:fa95h10; wu:fb96c06
Orthologs

Genomic context

See krt8 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
9
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (10249626..10254241, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (10314656..10319271, complement)
103 previous assembly Zv9 (GCF_000002035.4) 23 NC_007134.5 (10355850..10360519, complement)

Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene zgc:171775 Neighboring gene keratin 5 Neighboring gene keratin 18a, tandem duplicate 1 Neighboring gene keratin 18a, tandem duplicate 2

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Clone Names

  • MGC85764, MGC174782

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
intermediate filament IEA
Inferred from Electronic Annotation
more info
 
keratin filament IEA
Inferred from Electronic Annotation
more info
 
nuclear matrix IEA
Inferred from Electronic Annotation
more info
 
nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
keratin, type II cytoskeletal 8
Names
CK-8
K8
cytokeratin-8
etID33550.23
etID43142.23
etID43142.8
keratin, type 2, gene 8

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200080.2NP_956374.1  keratin, type II cytoskeletal 8

    See identical proteins and their annotated locations for NP_956374.1

    Status: PROVISIONAL

    Source sequence(s)
    BC067610
    UniProtKB/Swiss-Prot
    Q6NWF6
    Related
    ENSDARP00000075658.4, ENSDART00000081215.5
    Conserved Domains (3) summary
    pfam00038
    Location:114425
    Filament; Intermediate filament protein
    pfam16208
    Location:87111
    Keratin_2_head; Keratin type II head
    cl23720
    Location:326394
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007134.7 Reference GRCz11 Primary Assembly

    Range
    10249626..10254241 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395128.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    153237..157869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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