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dpy19l3 dpy-19 like C-mannosyltransferase 3 [ Danio rerio (zebrafish) ]

Gene ID: 796987, updated on 9-Sep-2025
Official Symbol
dpy19l3provided by ZNC
Official Full Name
dpy-19 like C-mannosyltransferase 3provided by ZNC
Primary source
ZFIN:ZDB-GENE-100319-1
See related
Ensembl:ENSDARG00000079013 AllianceGenome:ZFIN:ZDB-GENE-100319-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable mannosyltransferase activity. Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human DPY19L3 (dpy-19 like C-mannosyltransferase 3). [provided by Alliance of Genome Resources, Jul 2025]
Orthologs
human mouse all
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See dpy19l3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2025_04 current GRCz12tu (GCF_049306965.1) 7 NC_133182.1 (49096144..49222110)
RS_2024_08 previous assembly GRCz11 (GCF_000002035.6) 7 NC_007118.7 (47287307..47417260)

Chromosome 7 - NC_133182.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC141375120 Neighboring gene zinc finger protein 507 Neighboring gene si:ch211-186j3.6 Neighboring gene uncharacterized LOC141375122 Neighboring gene uncharacterized LOC137496211 Neighboring gene uncharacterized LOC141375124 Neighboring gene uncharacterized LOC141375125

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables mannosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
protein dpy-19 homolog 3; protein C-mannosyl-transferase DPY19L3
Names
dpy-19-like 3

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RefSeqs of Annotated Genomes: GCF_049306965.1-RS_2025_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz12tu Primary Assembly

Genomic

  1. NC_133182.1 Reference GRCz12tu Primary Assembly

    Range
    49096144..49222110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_073907243.1 → XP_073763344.1  protein C-mannosyl-transferase DPY19L3 isoform X6

    UniProtKB/TrEMBL
    A0A8M1PUJ6, E7FFI3

  2. XM_021477948.3 → XP_021333623.1  protein C-mannosyl-transferase DPY19L3 isoform X6

    UniProtKB/TrEMBL
    A0A8M1PUJ6, E7FFI3
    Conserved Domains (1) summary
    pfam10034
    Location:57 → 710
    Dpy19; Q-cell neuroblast polarisation

  3. XM_001337368.9 → XP_001337404.2  protein C-mannosyl-transferase DPY19L3 isoform X6

    See identical proteins and their annotated locations for XP_001337404.2

    UniProtKB/TrEMBL
    A0A8M1PUJ6, E7FFI3
    Related
    ENSDARP00000100140.2
    Conserved Domains (1) summary
    pfam10034
    Location:57 → 710
    Dpy19; Q-cell neuroblast polarisation

  4. XM_073907242.1 → XP_073763343.1  protein C-mannosyl-transferase DPY19L3 isoform X4

  5. XM_073907239.1 → XP_073763340.1  protein C-mannosyl-transferase DPY19L3 isoform X2

  6. XM_073907241.1 → XP_073763342.1  protein C-mannosyl-transferase DPY19L3 isoform X4

  7. XM_073907237.1 → XP_073763338.1  protein C-mannosyl-transferase DPY19L3 isoform X2

  8. XM_073907246.1 → XP_073763347.1  protein C-mannosyl-transferase DPY19L3 isoform X7

  9. XM_073907245.1 → XP_073763346.1  protein C-mannosyl-transferase DPY19L3 isoform X7

  10. XM_073907249.1 → XP_073763350.1  protein C-mannosyl-transferase DPY19L3 isoform X9

  11. XM_073907248.1 → XP_073763349.1  protein C-mannosyl-transferase DPY19L3 isoform X9

  12. XM_009303412.5 → XP_009301687.1  protein C-mannosyl-transferase DPY19L3 isoform X5

    UniProtKB/TrEMBL
    A0A8M3AUH9
    Conserved Domains (1) summary
    pfam10034
    Location:74 → 728
    Dpy19; Q-cell neuroblast polarization

  13. XM_073907240.1 → XP_073763341.1  protein C-mannosyl-transferase DPY19L3 isoform X3

  14. XM_073907236.1 → XP_073763337.1  protein C-mannosyl-transferase DPY19L3 isoform X1

  15. XM_073907247.1 → XP_073763348.1  protein C-mannosyl-transferase DPY19L3 isoform X8

RNA

  1. XR_012382637.1 RNA Sequence

  2. XR_012382636.1 RNA Sequence

  3. XR_012382640.1 RNA Sequence

  4. XR_012382639.1 RNA Sequence

  5. XR_012382642.1 RNA Sequence

  6. XR_012382635.1 RNA Sequence

  7. XR_012382638.1 RNA Sequence

  8. XR_012382641.1 RNA Sequence

Nucleotide Protein Strain
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