Format

Send to:

Choose Destination

WDR25 WD repeat domain 25 [ Homo sapiens (human) ]

Gene ID: 79446, updated on 23-Nov-2021

Summary

Official Symbol
WDR25provided by HGNC
Official Full Name
WD repeat domain 25provided by HGNC
Primary source
HGNC:HGNC:21064
See related
Ensembl:ENSG00000176473 MIM:618059
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C14orf67
Summary
This gene encodes a protein containing 7 WD repeats. WD repeats are approximately 30 to 40-amino acid domains containing several conserved residues, typically having a Tryptophan-Aspartic acid dipeptide (WD) at the C-terminal end. WD domains are involved in protein-protein interactions in a variety of cellular processes, including cell cycle progression, signal transduction, apoptosis, and gene regulation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2017]
Expression
Ubiquitous expression in thyroid (RPKM 3.8), testis (RPKM 2.7) and 25 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See WDR25 in Genome Data Viewer
Location:
14q32.2
Exon count:
8
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (100376485..100530303)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (100842822..100996640)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 47 Neighboring gene tryptophanyl-tRNA synthetase 1 Neighboring gene NADH:ubiquinone oxidoreductase subunit B3 pseudogene 4 Neighboring gene Sharpr-MPRA regulatory region 10653 Neighboring gene uncharacterized LOC105370664 Neighboring gene high mobility group nucleosome binding domain 1 pseudogene 25 Neighboring gene RN7SK pseudogene 92 Neighboring gene brain enriched guanylate kinase associated Neighboring gene uncharacterized LOC105370667 Neighboring gene long intergenic non-protein coding RNA 523

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Associated conditions

Description Tests
Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
GeneReviews: Not available

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC4645

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
WD repeat-containing protein 25
Names
epididymis secretory sperm binding protein

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_053195.1 RefSeqGene

    Range
    5007..158894
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001161476.3NP_001154948.1  WD repeat-containing protein 25 isoform a

    See identical proteins and their annotated locations for NP_001154948.1

    Status: REVIEWED

    Source sequence(s)
    AL135838, AL845552
    Consensus CDS
    CCDS32157.1
    UniProtKB/Swiss-Prot
    Q64LD2
    Related
    ENSP00000385540.3, ENST00000402312.8
    Conserved Domains (2) summary
    sd00039
    Location:251290
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:239543
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  2. NM_001350947.2NP_001337876.1  WD repeat-containing protein 25 isoform a

    Status: REVIEWED

    Source sequence(s)
    AL135838, AL845552
    Consensus CDS
    CCDS32157.1
    Conserved Domains (2) summary
    sd00039
    Location:251290
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:239543
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  3. NM_001350948.2NP_001337877.1  WD repeat-containing protein 25 isoform a

    Status: REVIEWED

    Source sequence(s)
    AL135838, AL845552
    Consensus CDS
    CCDS32157.1
    Related
    ENSP00000450661.1, ENST00000554998.5
    Conserved Domains (2) summary
    sd00039
    Location:251290
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:239543
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  4. NM_001350949.2NP_001337878.1  WD repeat-containing protein 25 isoform b

    Status: REVIEWED

    Source sequence(s)
    AL135838, AL845552
    Conserved Domains (2) summary
    sd00039
    Location:4680
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:15293
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  5. NM_001387351.1NP_001374280.1  WD repeat-containing protein 25 isoform b

    Status: REVIEWED

    Source sequence(s)
    AL135838, AL845552
    Related
    ENSP00000441903.2, ENST00000542471.2
    Conserved Domains (2) summary
    sd00039
    Location:4680
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:15293
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  6. NM_024515.6NP_078791.3  WD repeat-containing protein 25 isoform a

    See identical proteins and their annotated locations for NP_078791.3

    Status: REVIEWED

    Source sequence(s)
    AL135838, AL845552, AY295082, BG705426, HY044677
    Consensus CDS
    CCDS32157.1
    UniProtKB/Swiss-Prot
    Q64LD2
    Related
    ENSP00000334148.6, ENST00000335290.10
    Conserved Domains (2) summary
    sd00039
    Location:251290
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:239543
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    100376485..100530303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001350950.1: Suppressed sequence

    Description
    NM_001350950.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.
Support Center