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Spz1 spermatogenic leucine zipper 1 [ Mus musculus (house mouse) ]

Gene ID: 79401, updated on 9-Mar-2023

Summary

Official Symbol
Spz1provided by MGI
Official Full Name
spermatogenic leucine zipper 1provided by MGI
Primary source
MGI:MGI:1930801
See related
Ensembl:ENSMUSG00000046957 AllianceGenome:MGI:1930801
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700027M20Rik
Summary
Predicted to enable DNA-binding transcription factor activity. Located in nucleus. Is expressed in several structures, including genitourinary system and heart. Orthologous to human SPZ1 (spermatogenic leucine zipper 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Spz1 in Genome Data Viewer
Location:
13; 13 C3
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (92711139..92712740, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (92574631..92576232, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 151, member B Neighboring gene predicted gene, 52060 Neighboring gene zinc finger, FYVE domain containing 16 Neighboring gene serine incorporator 5 Neighboring gene predicted gene, 41018 Neighboring gene peptidylprolyl isomerase A (Ppia) pseudogene

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription factor activity TAS
Traceable Author Statement
more info
PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IDA
Inferred from Direct Assay
more info
PubMed 
enables E-box binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
spermatogenic leucine zipper protein 1
Names
bhlh-zip transcription factor SPZ1
spermatogenic Zip 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_030237.3NP_084513.3  spermatogenic leucine zipper protein 1

    See identical proteins and their annotated locations for NP_084513.3

    Status: VALIDATED

    Source sequence(s)
    AC154363, AF271697, AK006437
    Consensus CDS
    CCDS26683.1
    UniProtKB/Swiss-Prot
    Q80X69, Q99MY0
    Related
    ENSMUSP00000054083.5, ENSMUST00000050658.6

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    92711139..92712740 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)